| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1623 |
|---|
| Symbol | |
|---|
| ID | 4476587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1909954 |
|---|
| End bp | 1910793 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639726206 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869262 |
|---|
| Protein GI | 117920070 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0568829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTACAGA TAGGAAAAAC CTGCAAACTT GAGGTGGTAA AACAAGTAAG CTTCGGTGTG
TATTTAAATG CCCACGAATT TGGCCAAGTG TTACTGCCCA ACAAAGCCAC CCCAAAAGAT
TGCCAAGTCG GTGACTGGCT AGAGGTATTT TTATATCTGG ACTCTGAAGA TATTGTCATT
GCCACAACGC GCAAACCGCT TGCGCAAGTC GGTGAGTTTG CCTATCTAAA AGTCGTGGCA
ACGGGTCCCT ACGGGGCATT TTTAGACTGG GGATTAGATA AAGATCTGCT GCTGCCCTTT
GGCGAGCAGC ATAAACCCAT CGAAGAAGGC CGCTCATACC TCGTTTACGT GCATGTTAAC
CGCGCGGATG AACGTATTGT CGCCTCATCA AAAATTGATA AGTTCCTCGA TAAAACTCCA
GCGCAGTATG AAGTGGGTCA ACAGGTTGAC TTATATATCG GTGGCACCAC AGATTTAGGC
TACAAAGCCA TTATTAACCA TGCCCACTGG GGCGTGATTT ACCAAAACGA AGTGTTCCAA
AAGCTGCGTT TTGGCCAAAG GGTTAAAGGT TTTATCAAAC AAGTGCGCCG CGATGGCAAA
ATCGATCTGG TCTTGCAGCA AGGCAGTAAG CAAGAGCTCG ATAAGCATGC GCACATTATC
TTAGTAAAAC TCAAGCAAGC GGGTGGTTTC TTACCGCTGA CCGATAAAAC CGATGCCGAA
GTGATTTACG AGCAACTCGG CATGAGTAAA AAAGCCTTCA AGAAGAGCAT CGGCGGCCTG
TTTAAAGCGG GCAAATTAAG TATCGACGAT GATGGCTTAC GCCTGACGGA AACAGACTGA
|
|---|
| Protein sequence | MVQIGKTCKL EVVKQVSFGV YLNAHEFGQV LLPNKATPKD CQVGDWLEVF LYLDSEDIVI
ATTRKPLAQV GEFAYLKVVA TGPYGAFLDW GLDKDLLLPF GEQHKPIEEG RSYLVYVHVN
RADERIVASS KIDKFLDKTP AQYEVGQQVD LYIGGTTDLG YKAIINHAHW GVIYQNEVFQ
KLRFGQRVKG FIKQVRRDGK IDLVLQQGSK QELDKHAHII LVKLKQAGGF LPLTDKTDAE
VIYEQLGMSK KAFKKSIGGL FKAGKLSIDD DGLRLTETD
|
|---|
| |