| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1584 |
|---|
| Symbol | |
|---|
| ID | 4478813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1858896 |
|---|
| End bp | 1859612 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639726159 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869224 |
|---|
| Protein GI | 117920032 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.753254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.316977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCC CCTCTATCCT GTGCGCATCC GCCATACTGC TTGCCAGCCT GCAACCCGTT
AGTGCCGAAG TTCTCCTGCA GCTACCAAGT GATGTCGAGC TGTTAACCGT GAATGGACAA
AAGCCATTAA GCACCTCGCC AGTCACGCTG AGTGATGGAT TGAACCAAAT CGCGTTTCGC
TACAATGCCC AGTACCGCAA ACAGGCTAAT TCGGTACGCT ACCAATCGGA CGTACTGATC
ATCCGCTTTA ATGAAACCGA CCAAGCATTA CAGCTCAAAC TGCCCAATAT CGACTCGGCT
AAAGCCGCAA AGCAGTTCGA TGAGTCACCG TCAATCACGC TGTTAGATAA GCACAATCAA
GCGATTAGCT TTGACCAAGA CAGATTAGTG AAAAACGGGC TTCAGATAGG CCGAAACTTC
GAGCAGGAAA TCTTTCAATA CAATCAAGGC CAACATCCCG CCTCGATAAC GCTTGCTGCG
GTGCAAAGCC AGCCTCAAGT ATCAGCGACA ACGAGAGCAC CAACTCTGCA AGCCGCCACT
TCAGCGCCAT CAACAGCCGT AACCGCCAGT GCAGCCGCAT CAACAGCTGC AGTAACACAA
GACACAGCAC CTGACTCGCC GACCCAAGCT GAAATCAGCC ATATGCTGGA TTATTGGTAT
CACCTCGCCG ATGACGCCAC CAAAGCAAAA TTCAAGGCCA AAATTAACGA GCAATAA
|
|---|
| Protein sequence | MKSPSILCAS AILLASLQPV SAEVLLQLPS DVELLTVNGQ KPLSTSPVTL SDGLNQIAFR
YNAQYRKQAN SVRYQSDVLI IRFNETDQAL QLKLPNIDSA KAAKQFDESP SITLLDKHNQ
AISFDQDRLV KNGLQIGRNF EQEIFQYNQG QHPASITLAA VQSQPQVSAT TRAPTLQAAT
SAPSTAVTAS AAASTAAVTQ DTAPDSPTQA EISHMLDYWY HLADDATKAK FKAKINEQ
|
|---|
| |