Gene Shewana3_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1580 
Symbol 
ID4478804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1849483 
End bp1850082 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content51% 
IMG OID639726150 
Producthypothetical protein 
Protein accessionYP_869220 
Protein GI117920028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.530554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0781928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAC CGTTACTTTG GCTAGGCAGC GCGGCTATGG GGGCGTTGTT GCTCGCCGAT 
GAGCGTGAAA AGCGCCTGCA GCTTGAGCGT GACCGCTTAT TAGGCAAGGC TCCACGGCAA
ACGACGGGCA GCCAAGCCAT GGTCGCAGCG CCAAGTCAGT GGCAAAAGGG CTTTAAACAA
GTCTCGCCGC AGCCAGGCAG TATTGTCTGC TGCTATGTGT TTGGGGTCAT TGAACATACG
GGCATTTGGT TGGCGGATGA TTGCCTCGTC GAGCTACATG GCTCAGGGCT GATAAGGGCG
GTATCGGTAA AGCGCTTTTT AGCGGGGCGC ACTGGTAGCC AAATCTATAT TGCCTGTAAT
CATCAACATC AACCACTGAT TGCCAGTGAT ATGGTGAGCC GCGCCCAGCG GGCCATTTAT
CAATACCGCG AATACGATTT GTTCGACAAC AACTGCCATC GATTCGTCTG GTCATGCTTG
TGTGGTGAGG AGGTGGCCAT AAAAAGTTTT AACGAATTAA ATCAAAAACT CGCAGGCTAT
TTTAAGCAGG GGATTTACTG GGATGAAATG CGTCGAGTGC CTGAAGAGAT AAAAATGTAA
 
Protein sequence
MPLPLLWLGS AAMGALLLAD EREKRLQLER DRLLGKAPRQ TTGSQAMVAA PSQWQKGFKQ 
VSPQPGSIVC CYVFGVIEHT GIWLADDCLV ELHGSGLIRA VSVKRFLAGR TGSQIYIACN
HQHQPLIASD MVSRAQRAIY QYREYDLFDN NCHRFVWSCL CGEEVAIKSF NELNQKLAGY
FKQGIYWDEM RRVPEEIKM