Gene Shewana3_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1571 
Symbol 
ID4478795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1838793 
End bp1839998 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content49% 
IMG OID639726141 
Productmetal dependent phosphohydrolase 
Protein accessionYP_869211 
Protein GI117920019 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000899891 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCAAAAG CAGCCCAACG AAAACTATTA CTTTCCGAAC TTCAACTTGG CATGAGGGTC 
AAGTTGCCTT TGTCATGGAC GAATCACCCT TTTTTATTTA ACCGTGTGGA TATCAGTAGT
CCGGCTCACA TTGAGATGAT CCGCGGACTC GGTGTGCCCT ATGTGTATCT GATCTCAGGC
AGTAGTGATG AACTCGAATC GACGGATGAA GAGGAAAATG TCGAGGAGAT TGAAGAAGCA
CCACCGGAGC GCGACTTAAA GGCCGATACC CGTAAGGCGA TGCGTTTTAG CCAGAGGCGT
TTTTTAGAGA GCGTTAACCA GTGCCGCAAT GTGTATGGCA AAGTGGTGAG CGACCCAGAA
GGCGCTTATC GCTTGTCGGC CGCCTTAGTA GAAGATTTAC TCAGCCACCT GCAAGAGGTC
GAGAAACCTT TCCTCACTTT GGTCGGAATG GATGAAAAAG ATGTCAGTGT GACTCAACAC
GGCATCTCGG TAGCAGTATT AGCCATGATG ATAGGTCAGG CACTCGACTT GCCGGCGCGG
GATCTGCGCG ATATTGCCTT GGGGAGCCTG TTCCACGATA TAGGCAAACT CAAAGTCCCG
GATGTGATCC GCCGTAAACG GGGCGCATTA ACTCCCCATG AGGCCAATTA CCTGCAAATG
CACCCGAACT TTGGTTATGA CATGCTGAAT CGCTCGGGAC TTTTCCCAAA GGAAGTGCTG
AATATTGTAT TGCATCACCA TGAGTTTATT GATGGTTCAG GTTTTCCCGA TGGACTCTCA
GGGGCCAAAA TCCCCATTAC CACTCAAATA GTGAGTCTGG CGAACGATTA CGATCAGCAG
CTCAGTGGTG AGCAGGCGTC TTCACCGCAG GTGGCTTTAG GTTATTTATT TAAAAATCGT
GCGAGTAAAC ATGCCGAATC CTTAATTGCG GTGTTGGTTA AGATTTTAGG TATCTATCCG
CCGGGTACTA TCGTCAAGTT ATCCGACGAC ACTGTTGCTA AGGTGATCAT GACCACCAAA
GAGGTGAGTC AGCCGCAGGT GTGGGCCTGT AAGGAAGATG GCAGCGAGGC CTCGTTACGC
TTTTTAAGTG ATGAAGGGGT GACGGTACAA AAAACCATTC GCGCGGAAGA GTTAACCGAG
GGCGCGATCC GCACCTTGCA AATGGATAAA GGCATTAGTT TTTATTTTAG CTCGTTCCAA
GCTTGA
 
Protein sequence
MAKAAQRKLL LSELQLGMRV KLPLSWTNHP FLFNRVDISS PAHIEMIRGL GVPYVYLISG 
SSDELESTDE EENVEEIEEA PPERDLKADT RKAMRFSQRR FLESVNQCRN VYGKVVSDPE
GAYRLSAALV EDLLSHLQEV EKPFLTLVGM DEKDVSVTQH GISVAVLAMM IGQALDLPAR
DLRDIALGSL FHDIGKLKVP DVIRRKRGAL TPHEANYLQM HPNFGYDMLN RSGLFPKEVL
NIVLHHHEFI DGSGFPDGLS GAKIPITTQI VSLANDYDQQ LSGEQASSPQ VALGYLFKNR
ASKHAESLIA VLVKILGIYP PGTIVKLSDD TVAKVIMTTK EVSQPQVWAC KEDGSEASLR
FLSDEGVTVQ KTIRAEELTE GAIRTLQMDK GISFYFSSFQ A