| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1558 |
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| Symbol | |
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| ID | 4478782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1817567 |
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| End bp | 1820218 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639726128 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_869198 |
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| Protein GI | 117920006 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.786788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.359395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA ATTCGACATT AGCCAAAGCG GTTCGCTTTG CGTTAATTGG TGGTGCCACA
ACAGCAGCTT TATCTAGTAC TGTTGTTTAT GCTGCAGAGG ATAACGCTAA GGTAGAACGT
ATTGAAGTAA CAGGTTCCCG TATTCAAAGA ACTGATATGG AATCAGCGTT ACCTGTTACT
GTTTTATCGG CCGAAGATAT TGCCAAAACA GGTTTAAGTG ATGTTTCTGC TGTTTTAGCA
CAAATGCCAT TTAACACTGC TGGTAGTTTT ATTAGTGATG CAGGTAGCTC TGCAAGTAAC
CATGCCAGTT CTGGTATGCG TGGTTTAGGT TCAAACCGTA CGTTAACCCT GATCAACGGT
CGCCGTATTG CGCCATCTGC AACCTTTGGT GGCGATTCAA CGAACCTCAA CTTAATCCCT
ATGGATGCAA TCGAGCGTAT TGAAATTTTA CGTGACGGTG CATCAGCAAT TTACGGTTCA
GATGCTATCG GTGGTGTAAT TAACATCATC CTGAAAAAAA CCTTTGACGG TTTAGCATTC
GACGCTAAGT TTGGTAGCCC AACTCAAGGT GGTAGAGATG AGAAATCAGC TTCTGTCACT
TTCGGTAATA CTAGCGATAA AAGCAGCAGC TTAGTGATCA TCGAACACAA GCAATTTGAT
CCACTACAAG GTGGTCAACG TCCTCACTTA ACGGCTAACT GGGATAAAAA ATACGGTCGT
AGTGGTTTAT ATGCGCCAGA AGGCACATAT CGTCCAGTTG AATCTCGCCC GGTAAAAGGT
GCTGATGGTA CTTTCGGCAC TCCTGTTTAT ACAGGTTTGC AAGTTCCAGG TAAGGACTGT
CCAGCGGATC GTATTGTTAC CAGCAAAGAC GGTTCTGCTT GTGGTTTTAA CCAATTTGAT
GGCACTGATT ACCTACCAGA TCAGACAAAA GACTCTGTAT TCTCGAATAT GACTTATCGC
ATTACCGATG AATTAGAGTG GTTTGGTCAA GCTATCGTTA TGCGTGATAA ATCCATCACC
TCTTCAACTG CGCTATGGAC TCCTAACTTA TACATGGCAG CAGATAACCC ATTAAACCCA
ACATTCGGTA CCGCTAATGC ATCTGAAGTG CAAGCCTATC ACCGTTTGAA AGGGGTTGCA
GACCGTAAAA CAGAATTCGA TTCAAACGTA GTTGATATCG TAACGGGTCT AAACCTTGAA
TTAGATGCAG GCTCTCTAAG CTGGTACGTA CAATACTCAG ATCAAATCGT GAACATTGAA
ACTGACTCTT ACGTATTCGA AGATAAGTTA CAAGAAGCAG TAGATAAAGG CTTGTACAAC
CCATTCGTTG AGGGTGGTAA CGCAACCCAA GACACGTTAG ACACCTTCTT ACACACAGCT
ACTCGTAAAG CGACATCTAA CACAACAGGT ACTGGTATAT CTTGGGCTGC ACTGGCTCCA
ATTTCATTAC CTGGTGGTGA CTTAGGTTAC GCAGTGGGTA TGGAATACCA AAAAATCGAA
TACAAAGATA CCCGTGATGC TCAACAAGCA GCAGGTAACG TATTAGGTAC TTACGGCGGT
GATTCTGCTG GTGATAGAAG CTATAAAGCA GCATTCGTTG AGTTGGAACT GCCAGTATTA
GATCACTTAA ACGTGAAACT AGCGAGCCGT TACGACCAAT ATAGCTTGCC AGATGTTGGT
CAGCTTTCAA GCTCTGTAAA CGTACGTTAC GAAGCATTAG ATAACCTAGT GTTACGTGCA
TCTTACGGCC AAGGCTTTAG AGCACCATCA CTGGATGACT TGTTAGGCAA GCCAGCAACC
AGTTATGACA GAATCACTGA CACCACTCTG TGTCAAAGTC TGCCTGCTGA TCAGAAAGAC
GGCAACCCAG CTTGTGAAGA TAACCAATAC CTACGTAAGA GTTCAGGTAA CACAGAGCTA
GATCCTGAGA AATCTGCTCA GTACTCTTTC GGTGCCGTAT GGAATATCAC TGAAAACATC
GACTTAGTTG TTGATTATTA CAACATCGAA ATCACAGACC AAGTCAGCTA CATCGATGCA
CAAACAATTG TGGATTTAGA AGCGATTGGT GGCTTAGGTG CTTATGACCC TAACTACATC
TACGTCAAAC GTAAAGCTGA CGGTACCATC GATGAAATTG GCGCTGGCAA CATCAACATG
GATGGCGTAC AAACATCAGG TCTTGACGTG TCATTCACCT CAAACTTCGA TTTTGCTGAA
TTTGGTGCAT TTAAGTTTGC GGTTGAAGGA ACCTATGCTC TTGAATATAC AGAGCAAGCA
AGCCCGATTG CAAAACGTTA TGACGTATTA GGCACTAAGG GTTATCCACC ACTACGTTTC
AATACAACAT TTAGCTACGC CATTGATGAC TTCTCAGCAT CTTTGATTGC TAAATACATT
GATTCTTATG ATGGTGAAAC TCCACAACAA CAAGAAGTTG GCACAAATAA ACAAGACTTC
TCATCGTTCA CTACGTGGGA TCTGACATTG AACTACGACT TCGACAGCTA TGGCAAAGTT
ACTGTTGGTG CTCGTAACTT GTTCGATGCG ATGCCAACAG TTAACTACAG CTTAGGTTAC
CCTGGATACG ATACTGACAC CCATAACATC GTGGGCCGTG TAGTGTTTGC AGGATATAAA
GTGAAATTCT AA
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| Protein sequence | MRANSTLAKA VRFALIGGAT TAALSSTVVY AAEDNAKVER IEVTGSRIQR TDMESALPVT
VLSAEDIAKT GLSDVSAVLA QMPFNTAGSF ISDAGSSASN HASSGMRGLG SNRTLTLING
RRIAPSATFG GDSTNLNLIP MDAIERIEIL RDGASAIYGS DAIGGVINII LKKTFDGLAF
DAKFGSPTQG GRDEKSASVT FGNTSDKSSS LVIIEHKQFD PLQGGQRPHL TANWDKKYGR
SGLYAPEGTY RPVESRPVKG ADGTFGTPVY TGLQVPGKDC PADRIVTSKD GSACGFNQFD
GTDYLPDQTK DSVFSNMTYR ITDELEWFGQ AIVMRDKSIT SSTALWTPNL YMAADNPLNP
TFGTANASEV QAYHRLKGVA DRKTEFDSNV VDIVTGLNLE LDAGSLSWYV QYSDQIVNIE
TDSYVFEDKL QEAVDKGLYN PFVEGGNATQ DTLDTFLHTA TRKATSNTTG TGISWAALAP
ISLPGGDLGY AVGMEYQKIE YKDTRDAQQA AGNVLGTYGG DSAGDRSYKA AFVELELPVL
DHLNVKLASR YDQYSLPDVG QLSSSVNVRY EALDNLVLRA SYGQGFRAPS LDDLLGKPAT
SYDRITDTTL CQSLPADQKD GNPACEDNQY LRKSSGNTEL DPEKSAQYSF GAVWNITENI
DLVVDYYNIE ITDQVSYIDA QTIVDLEAIG GLGAYDPNYI YVKRKADGTI DEIGAGNINM
DGVQTSGLDV SFTSNFDFAE FGAFKFAVEG TYALEYTEQA SPIAKRYDVL GTKGYPPLRF
NTTFSYAIDD FSASLIAKYI DSYDGETPQQ QEVGTNKQDF SSFTTWDLTL NYDFDSYGKV
TVGARNLFDA MPTVNYSLGY PGYDTDTHNI VGRVVFAGYK VKF
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