| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1556 |
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| Symbol | |
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| ID | 4478780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1814601 |
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| End bp | 1815575 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726126 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_869196 |
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| Protein GI | 117920004 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.331691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.232428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT CACATGCTAA CGCTCCACAA ACATCCTCGA CTGGCCATGA GCCAATACAG
GTTTCTTCAC ACTTTAGTTG TTATCACCAA GCCGAAATTT ACGGCAAAAG CAAAGTGGTT
AAGGCGCCTT GGCAATCCTT TGGTTTAGCG GTATTTGCTG GCGCTTTTAT TGCCTTAGCC
TTTGTGTTTT ATCTGACAGT CACTACGGGT GCCGGTGATA GCGCCTGGGG TTTAGTGCGC
CTGGTGGGCG GGATTGCCTT CAGCTTAGGT TTAATTTTGG TGGTGATTTG CGGTGGCGAG
CTGTTTACCA GTTCGGTGCT GAGCAGCGTT GCATGGGCGC AAAAACAGGT GACCACCAGT
GAATTGCTCA AATGCTGGAG CCGCGTGTAT ATCGGCAACT TCGTCGGCGC CATGTTAATG
GTTGGCTTGA TCATGGCGGC GGGCTTGTAT GAGCTCGATG GCGGTAACTG GGGCTTAAAC
GCGCTAAAAG TGTCGCAACA TAAGCTGCAT CATACTTGGG TGCAGGCATT CAGCTTAGGT
ATTTTATGTA ACATGTTGGT GTGTCTGGGT ATTTGGATGA CCTTCGCCAG CCGCGAATCC
CTAACCAAAG CGATTTTACT GATCCTCCCT GTAGCCATGT TTGTCAGCAG TGGCTTTGAG
CACAGTATTG CAAACCTTTT TATGGTGCCG CTTGGGATCA CTATTCAGTC GGTCGCCAGC
CCTGAGTTTT TTGCTTCTTT AGGCGTGACC CAAGAGCAAT TTGCCGATTT AACCGTGGCA
AACTTTGTAT TTAATAACTT AATTCCCGTT ACCTTAGGGA ACATTGTCGG TGGCGGCGTG
ATCGTTGGCC TTGGCTATTG GTGGATTGAG CAAGGTCAAA TTGCCTTACC CGATCCGCAA
AAATCCCATC AACCTCATTT TTTTGCATCG CCTCTGCATA CTGAAAAGGC GAAAAATAGC
CAAGAAAGTA AGTAA
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| Protein sequence | MKDSHANAPQ TSSTGHEPIQ VSSHFSCYHQ AEIYGKSKVV KAPWQSFGLA VFAGAFIALA
FVFYLTVTTG AGDSAWGLVR LVGGIAFSLG LILVVICGGE LFTSSVLSSV AWAQKQVTTS
ELLKCWSRVY IGNFVGAMLM VGLIMAAGLY ELDGGNWGLN ALKVSQHKLH HTWVQAFSLG
ILCNMLVCLG IWMTFASRES LTKAILLILP VAMFVSSGFE HSIANLFMVP LGITIQSVAS
PEFFASLGVT QEQFADLTVA NFVFNNLIPV TLGNIVGGGV IVGLGYWWIE QGQIALPDPQ
KSHQPHFFAS PLHTEKAKNS QESK
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