Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1554 |
Symbol | pflA |
ID | 4478778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1810497 |
End bp | 1811237 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639726124 |
Product | pyruvate formate lyase-activating enzyme 1 |
Protein accession | YP_869194 |
Protein GI | 117920002 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.202343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTA CCGGTCGGAT CCACTCAGTG GAATCCTTTG GCACAGTGGA TGGTCCAGGC ATACGGTTTA TCACCTTTAT GCAGGGCTGT TTAATGCGCT GTCAGTATTG TCATAACCGT GATACTTGGG ATCTTGATGG TGGCAAGGAA GTACAGGTCG ACGAGTTAAT GAGCCAAATC ATTAGCTACC GTCCCTTCCT AGATGCCAGC AACGGCGGTG TGACCGCCAG CGGTGGCGAA GCCATATTAC AGGCGGAGTT TGTCGCCGAA CTCTTTAAAG CCTGTAAAAA AGAAGGCATT CATACCTGTT TAGATACCAA CGGCTTTGTG CGTAAGTACA CGCCAGTGAT TGATGAGCTA CTCGATAATA CCGATCTGGT GTTGCTCGAT ATCAAACAAA TGAATGACGA TAAACACATT GAACTGACTA AGGTCAGTAA CCACAGAACG CTGCAATTTG CCGAGTATCT CGCCAAACGC AATCAGCCTA CCTGGATACG TTATGTGGTC GTGGGTGGAT TTACTGACGA TGAAGCTTCG GCATTACAGC TGGCCGAATT TATCAAGCCC ATGAAGAATA TTGAAAAAGT TGAACTCCTG CCCTACCACG AACTGGGTAA ACATAAGTGG GAAGCGATGG GAGAAACCTA TCAACTCGAT GGCGTTGCAC CACCGAGTCG CGACACAATG GAAAAAATTA AAGCCGTGTT TAGCTCACAG GGGATTAATG CGGTGTATTA A
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Protein sequence | MAVTGRIHSV ESFGTVDGPG IRFITFMQGC LMRCQYCHNR DTWDLDGGKE VQVDELMSQI ISYRPFLDAS NGGVTASGGE AILQAEFVAE LFKACKKEGI HTCLDTNGFV RKYTPVIDEL LDNTDLVLLD IKQMNDDKHI ELTKVSNHRT LQFAEYLAKR NQPTWIRYVV VGGFTDDEAS ALQLAEFIKP MKNIEKVELL PYHELGKHKW EAMGETYQLD GVAPPSRDTM EKIKAVFSSQ GINAVY
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