| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1551 |
|---|
| Symbol | |
|---|
| ID | 4478775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1806421 |
|---|
| End bp | 1808574 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639726121 |
|---|
| Product | phosphate acetyltransferase |
|---|
| Protein accession | YP_869191 |
|---|
| Protein GI | 117919999 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase |
|---|
| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0542172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.163745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAA ATATCATGTT AATCCCCATA GGCACTGGAG TTGGCCTGAC CTCCTTAAGC
CTAGGTATGG TGCGCGCGTT AGAGCGCCAC GGGGTAAAAG TCCAATTCTT TAAACCCATT
TCCCAGCTGC GTCCTAATGA TAATGGCCCA GAGCGCTCAA CCACGATTTT AAGCAAATCG
CCCACGGTCA ATCCGTTAGA GCCCTTCGAC ATGGCCCATG CCGAAGCACT GATCCGTGCC
GATCAAACCG ATGTGCTAAT GGAGCAAATC ATTGCCCGCG CCGCAGAATG CGCCAGCAAT
ACCGAAACCC TGATTGTTGA AGGCCTAGTG CCAACCCGTA ACCATCCCTT TGCCGACGAT
GTGAACTACG CCATCGCCAA GGCAATGGAT GCGGACGTGA TTTTCATTGC CACCCCCGGC
AGCGACACCC CAACCGGCCT GATGAACCGC CTCGAAATTG CCTACAACTC GTGGGGCGGC
AAAAACAACA AACGTCTTAT TGGTGCCGTG ATCAACAAGA TTGGCGCACC GGTAGACGAT
GAAGGTCGCG CTCGCCCAGA CTTATCGGAA GTGTTCGATC ATCAAGGCGT ACAACGCTCA
GATGCGTCCA TCATGTTCCA AATGCCAGGT AAGAGCCCAC TGCGCATCTT AGGTAGCGTG
CCTTACAACC TCGATTTGGT TGCGCCACGC GCATCGGATC TGGCGAAGCA TTTACGTGCC
CGCATTCTCA ATGCCGGCGA GATGAACACC CGCCGTCTGC GTAAAGTCAC CTTCTGCGCC
CGCAGCTTGC CCAATATGGT CAACCACATT AAGACAGACT CACTGCTGGT GACCTCTGGC
GATCGCTCCG ATGTGATTGT GTCAGCGTGT CTCGCCGCCA TGAACGGCGT GAAGATTGGT
GCCCTACTGC TCACTGGTAG CTACGAGCCA GAGCCTGAAA TTCTGAAACT GTGTGAACAG
GCCTTCGAGA CAGGTTTACC GGTATTCCTC ATCGATACTA ACACTTGGCA GACGTCATTA
AATATCCAAC GCTTCGACCA CGAAGTGCCA GTGGATGATG CGGTACGTAT CGATTTAGTC
CAAGAGTACG TTGCCAGCCA TATCGATCAG AGCTGGATTG AAAGCGTGAC CAAAAACTCT
CCAAGGGAAC ATCGTTTATC ACCTCCCGCG TTCCGTTATA AGCTCACCGA ACTTGCGCGC
GCCGCCCACA AAACTGTGGT ACTGCCTGAG GGTGATGAGC CACGTACCAT CAAGGCCGCC
GCGATATGTG CCGAACGGGG TATTGCGCGT TGCGTGCTGT TAGGTAAAAA AGATGAAATT
CAACGTATTG CAGCACAGCA AGACGTTGTT CTGGGCGAAG GCGTTGTGAT TGTCGACCCC
GATGAAGTTC GCGATCGCTA TGTTGAACCA ATGCTCGATC TGCGTCGCAA CAAAGGTTTG
ACTGAAGTCG TTGCCAAAGA ACAATTAGAA GACAACATGG TGCTCGGCAC TATGATGCTG
GCGCAAAACG AAGTCGATGG TATCGTCTCT GGCGCGGTAA ACACTACGGC CAATACGATT
CGTCCGCCGC TGCAACTGAT CAAAACCGCA CCGGGTTCTA GCCTTGTTTC TTCCATCTTC
TTTATGTTGA TGCCAGACCA AGTGCTGGTT TACGGTGACT GTGCGATTAA CCCCGATCCT
AACGCTGAAC AACTGGCCGA TATCGCGATT CAATCGGCAG AATCTGCCAA GGCCTTCGGC
ATAGAACCAA GAGTGGCGAT GATCAGCTAC TCAACCGGTA ACTCAGGTAC TGGTTCAGAT
GTGGATAAAG TGCGTGAAGC GACCCGTATC GCGAAAGAAA AACGTCCTGA TCTAGTAATC
GACGGTCCAC TGCAATACGA TGCGGCCGTC ATGCCAAACG TGGCTCGCTC TAAGGCGCCT
AACAGCCCTG TTGCAGGTCA AGCGACTGTA TTCGTGTTCC CAGATCTCAA CACGGGTAAC
ACCACTTACA AAGCTGTACA GCGTAGTGCT GACCTCATCA GTATTGGCCC CATGCTGCAA
GGCATGCGTA AGCCTGTGAA CGACTTATCC CGCGGCGCCT TAGTGGACGA TATCGTCTAC
ACTATCGCAC TGACGGCGAT TCAAGCGTCA CAAAACGATG CCAGCAAAGC CTAA
|
|---|
| Protein sequence | MSRNIMLIPI GTGVGLTSLS LGMVRALERH GVKVQFFKPI SQLRPNDNGP ERSTTILSKS
PTVNPLEPFD MAHAEALIRA DQTDVLMEQI IARAAECASN TETLIVEGLV PTRNHPFADD
VNYAIAKAMD ADVIFIATPG SDTPTGLMNR LEIAYNSWGG KNNKRLIGAV INKIGAPVDD
EGRARPDLSE VFDHQGVQRS DASIMFQMPG KSPLRILGSV PYNLDLVAPR ASDLAKHLRA
RILNAGEMNT RRLRKVTFCA RSLPNMVNHI KTDSLLVTSG DRSDVIVSAC LAAMNGVKIG
ALLLTGSYEP EPEILKLCEQ AFETGLPVFL IDTNTWQTSL NIQRFDHEVP VDDAVRIDLV
QEYVASHIDQ SWIESVTKNS PREHRLSPPA FRYKLTELAR AAHKTVVLPE GDEPRTIKAA
AICAERGIAR CVLLGKKDEI QRIAAQQDVV LGEGVVIVDP DEVRDRYVEP MLDLRRNKGL
TEVVAKEQLE DNMVLGTMML AQNEVDGIVS GAVNTTANTI RPPLQLIKTA PGSSLVSSIF
FMLMPDQVLV YGDCAINPDP NAEQLADIAI QSAESAKAFG IEPRVAMISY STGNSGTGSD
VDKVREATRI AKEKRPDLVI DGPLQYDAAV MPNVARSKAP NSPVAGQATV FVFPDLNTGN
TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAS QNDASKA
|
|---|
| |