Gene Shewana3_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1458 
Symbol 
ID4479675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1690946 
End bp1691914 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID639726028 
Producthypothetical protein 
Protein accessionYP_869098 
Protein GI117919906 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000087198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACA GTGCGCTACA CGCATCCCTA CACAGTGACG GCAATCCACA TGGCTTGCCA 
TTGTTTGCCG ACGGGCTGCA TTTAACCGAG AAAGAACTGC TCGCCTGCCA GACGATTGCG
CGGGCTATTC CTGAGCGTCA CAGCCGGGCA CGAGCCAATA TGGCGGGACA TCGCAGCAGT
TTAATCAAAG GCCGCGGGAT GGAATTTGCC GAAGTGCGTC ACTATCAACA GGGCGACGAT
GTCCGCACCA TAGACTGGCG CGTGACCGCC CGCACTGGGC AAACCCACAC TAAGTTATTT
ATTGAGGAGC GCGAGCGCCC TATTCTGTTA CTGCTCGATT TAAGCCAGAG CCTGTATTTT
GGCTCGAGTT TATTATTGCA GTCGGTACAA GCGGGACATT TAGCGACCAC CCTAGGTTGG
AATGCCATCA ACCACGGTGA CAGACTCGGC GCCTTAATCG CCTGCGAATC TGAGCATCTA
GAGTTAAAAC CCCGCAGTCG CCGCCAAGGG ATATTGCAGC TCATTTCAGG ATTGCGCCGA
GTGCACGAGC AACAACTCAA TCAGCTCGGC AGTCATCCTC GGGATCCTGA TCATATCCTG
CGCGCATGCC AGCGCTTGCA ACGTATCGCG AAACCGGGCT CATTGATTTG GATCATCACA
GATGGCAGCC ATTTTACGCC GCAATGTATC GCGCCGCTGA CAGAACTTAA GCGCCATTGT
GATATTGGCG CCTATCTGGT GACCGACCCA CTCAGACAGG GCAACCTCAA TTTACCCAAG
CAGTTTAGTT TGCCCGTTCG CGAAGGGGAC CAAGATCGAG TGCTGACTCG CGACAGTTAT
CAAGCATGGC TTGGGCAGCA ACAACAGCAG CAAAATGACT TTATCGCCAT GATGCAAAAG
CTGAAGGTTC GTACCCAATT TATCGACGCG GGTTTACCCC TTGCGCAACA GTTAGCCTTA
CTGCAATAA
 
Protein sequence
MNNSALHASL HSDGNPHGLP LFADGLHLTE KELLACQTIA RAIPERHSRA RANMAGHRSS 
LIKGRGMEFA EVRHYQQGDD VRTIDWRVTA RTGQTHTKLF IEERERPILL LLDLSQSLYF
GSSLLLQSVQ AGHLATTLGW NAINHGDRLG ALIACESEHL ELKPRSRRQG ILQLISGLRR
VHEQQLNQLG SHPRDPDHIL RACQRLQRIA KPGSLIWIIT DGSHFTPQCI APLTELKRHC
DIGAYLVTDP LRQGNLNLPK QFSLPVREGD QDRVLTRDSY QAWLGQQQQQ QNDFIAMMQK
LKVRTQFIDA GLPLAQQLAL LQ