Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1458 |
Symbol | |
ID | 4479675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1690946 |
End bp | 1691914 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639726028 |
Product | hypothetical protein |
Protein accession | YP_869098 |
Protein GI | 117919906 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000087198 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAACA GTGCGCTACA CGCATCCCTA CACAGTGACG GCAATCCACA TGGCTTGCCA TTGTTTGCCG ACGGGCTGCA TTTAACCGAG AAAGAACTGC TCGCCTGCCA GACGATTGCG CGGGCTATTC CTGAGCGTCA CAGCCGGGCA CGAGCCAATA TGGCGGGACA TCGCAGCAGT TTAATCAAAG GCCGCGGGAT GGAATTTGCC GAAGTGCGTC ACTATCAACA GGGCGACGAT GTCCGCACCA TAGACTGGCG CGTGACCGCC CGCACTGGGC AAACCCACAC TAAGTTATTT ATTGAGGAGC GCGAGCGCCC TATTCTGTTA CTGCTCGATT TAAGCCAGAG CCTGTATTTT GGCTCGAGTT TATTATTGCA GTCGGTACAA GCGGGACATT TAGCGACCAC CCTAGGTTGG AATGCCATCA ACCACGGTGA CAGACTCGGC GCCTTAATCG CCTGCGAATC TGAGCATCTA GAGTTAAAAC CCCGCAGTCG CCGCCAAGGG ATATTGCAGC TCATTTCAGG ATTGCGCCGA GTGCACGAGC AACAACTCAA TCAGCTCGGC AGTCATCCTC GGGATCCTGA TCATATCCTG CGCGCATGCC AGCGCTTGCA ACGTATCGCG AAACCGGGCT CATTGATTTG GATCATCACA GATGGCAGCC ATTTTACGCC GCAATGTATC GCGCCGCTGA CAGAACTTAA GCGCCATTGT GATATTGGCG CCTATCTGGT GACCGACCCA CTCAGACAGG GCAACCTCAA TTTACCCAAG CAGTTTAGTT TGCCCGTTCG CGAAGGGGAC CAAGATCGAG TGCTGACTCG CGACAGTTAT CAAGCATGGC TTGGGCAGCA ACAACAGCAG CAAAATGACT TTATCGCCAT GATGCAAAAG CTGAAGGTTC GTACCCAATT TATCGACGCG GGTTTACCCC TTGCGCAACA GTTAGCCTTA CTGCAATAA
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Protein sequence | MNNSALHASL HSDGNPHGLP LFADGLHLTE KELLACQTIA RAIPERHSRA RANMAGHRSS LIKGRGMEFA EVRHYQQGDD VRTIDWRVTA RTGQTHTKLF IEERERPILL LLDLSQSLYF GSSLLLQSVQ AGHLATTLGW NAINHGDRLG ALIACESEHL ELKPRSRRQG ILQLISGLRR VHEQQLNQLG SHPRDPDHIL RACQRLQRIA KPGSLIWIIT DGSHFTPQCI APLTELKRHC DIGAYLVTDP LRQGNLNLPK QFSLPVREGD QDRVLTRDSY QAWLGQQQQQ QNDFIAMMQK LKVRTQFIDA GLPLAQQLAL LQ
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