| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1408 |
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| Symbol | |
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| ID | 4479005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1626427 |
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| End bp | 1628577 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725963 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_869048 |
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| Protein GI | 117919856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.289641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAA GTTTTATTGC CATCGCCATT GGCGCCACTT TGATGACAGG CGCACTCGCA
GGCTGCAGCA CTCAAGATAC TAAAGCGACG AATGTGACCG CAGTTCAAAC CCAAAATCCT
CTGTTCCAAG CCAGCACGCT GCAATACCAA GCGCCTGATT TTAGTGTCAT TAAAGACGAG
CATTTTCAGC CCGCATTAGA GCAAGGCATT AAAGAGCATT ATCAAGAGAT TTTGGCCATT
GCCAACAATC CTGCCGCCCC AACCTTCGAC AACACGATTG TCGCCATGGA AAAAAGCGGT
GCCCTGCTGA CCCGTGCATC GAGCGTGTTT TACAACCTCG CGGGTTCAAA CAGCAATCCT
GCCCTGCGTA AAATCCAAGG TGAGATGGCC CCGAAAATGG CAGCGCACTC AGATAACATC
AACCTCAATC CAGCACTATT CGCCCGTATT GAAACTATTT ATAACGACCG CAATAACTTA
GGCTTAACGT CTGAAGCGGT ACGTTTGGTT GAGGTGTATC ACCAACGCTT TATCATGGCC
GGTGCTAAAC TGACCGATGA GCAGAAAGTG AAGATCCGTG CCCTGAACGA AGAACAATCG
ACGCTGACCA ACGAGTTCTC ACAACGTTTA CTGCGCTTAA CCAAAGAAAT CGCCATCGTT
GTCGATAACA AAGAGCAACT GGCGGGCCTG ACTGACAGCG AAATCACCTC GGCAGCAAAC
GATGCCAAGG CCGCAGGCCA CGAAGGTAAG TACTTAATCA ACATCACCAA CACCACTCGC
CAGCCTGTTC TCGCCTCTTT AGAGAACCGT GAACTGCGCC AACGCATTTG GGAAGCCTCG
GCAAACCGTG GCTTAACGGG TGAAAACGAA ACCGCATCTT TAGTGTCTCG CCTTGCGCAA
TTACGTGCCG AGCGTGCCGC TCTATTAGGT TATGAAAACT GGGCCAGCTA CCGCCTCGCG
CCACAAATGG CAAAAACGCC TGAAGCGGTA TACAGCATGT TTGGTTCAAT GGTGCCTGCC
GTCGTCGCTA ATACCGAAAA AGAAGCTGCC GATATCCAAG CGATGATCGA CAAGACTGGC
GGCAAGTTTG AACTCGCGCC ATGGGACTGG GAATTCTACG CTGAGAAGGT TCGCCAAGAG
AAATACGCCC TCGATGCCAA TAGCATTCGC CCTTATTTCG AATTTAACCG CGTACTCGAA
GACGGTGTGT TCTACACCCT CAAAGAACTC TATGGCGTCA CCTTAAAGCC GCGCCCAGAT
TTACCCGTGT ACCACCCGGA TGTGAAAGCC TACGAAATGT TTGATGCCGA TGGTTCAAGC
ATGGCGATTT TCTACGCCGA CTACTTTGCC CGTGAAGGCA AACGCGGCGG CGCATGGATG
AGCTCGTTCG CGGGTCAATC CTTCCTCGAA GGCACTAAGC CTGTCGTGGT CAACGTGATG
AACATTAAAA AGGCGCCAGA GGGACAACCG ACCTTCGTCA GCTACAACGA AGTGACCACT
ATGTTCCACG AAATGGGCCA TGGTACCCAC GGTATGTTCT CTAAGGTGAC TTACCCAAGC
TTGGCGGGTA CTTCTGTCTC CCGTGACTTT GTGGAATTCC CATCAACCTT CGAAGAAGAC
TGGGCAGCCC ACCCTAAAGT GTTAGCCAAC TACGCCAAAC ACTACGAAAC AGGTAAGCCA
ATTCCCGATG ATTTGCTGCA AAAACTGCTC AAATCCGGCA GCTTTAACCA AGGCTTCGAT
ACCTTAGAGT ATATGGCTGC GGCGCTCGTC GACATGGAAT GGCACTCATT AAGCCCAGAT
GCCCCACTGC AAGATGTGGC GACATTTGAA GCCAATGCGC TGAAAAAACA CGGCTTAAAT
ATCACCGCCG TGCCACCACG TTATAAGTCA ACTTACTTTG CCCACGCCTT CCCAGGTGGT
TACTCAGCAA GTTACTACGC GTATATGTGG AGTGAAATTT TAGCGGCTGA CGCCTTTGCC
TATGTGCAAA CCCAAGGTGG ATTAAACCGT GAAATCGGTA TGAAATACCG CAAGACAATT
CGCGAAGTGG GCAACAGCAT TGCGCCAATG GAAGCCTATA AGAACTTCCG TGGTCAAGAG
CCTACCACCG AAGGGTTATT GAACCGCCGT GGACTCAACA CCGCCCTGTA A
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| Protein sequence | MRKSFIAIAI GATLMTGALA GCSTQDTKAT NVTAVQTQNP LFQASTLQYQ APDFSVIKDE
HFQPALEQGI KEHYQEILAI ANNPAAPTFD NTIVAMEKSG ALLTRASSVF YNLAGSNSNP
ALRKIQGEMA PKMAAHSDNI NLNPALFARI ETIYNDRNNL GLTSEAVRLV EVYHQRFIMA
GAKLTDEQKV KIRALNEEQS TLTNEFSQRL LRLTKEIAIV VDNKEQLAGL TDSEITSAAN
DAKAAGHEGK YLINITNTTR QPVLASLENR ELRQRIWEAS ANRGLTGENE TASLVSRLAQ
LRAERAALLG YENWASYRLA PQMAKTPEAV YSMFGSMVPA VVANTEKEAA DIQAMIDKTG
GKFELAPWDW EFYAEKVRQE KYALDANSIR PYFEFNRVLE DGVFYTLKEL YGVTLKPRPD
LPVYHPDVKA YEMFDADGSS MAIFYADYFA REGKRGGAWM SSFAGQSFLE GTKPVVVNVM
NIKKAPEGQP TFVSYNEVTT MFHEMGHGTH GMFSKVTYPS LAGTSVSRDF VEFPSTFEED
WAAHPKVLAN YAKHYETGKP IPDDLLQKLL KSGSFNQGFD TLEYMAAALV DMEWHSLSPD
APLQDVATFE ANALKKHGLN ITAVPPRYKS TYFAHAFPGG YSASYYAYMW SEILAADAFA
YVQTQGGLNR EIGMKYRKTI REVGNSIAPM EAYKNFRGQE PTTEGLLNRR GLNTAL
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