Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1397 |
Symbol | |
ID | 4478994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1612213 |
End bp | 1613337 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725952 |
Product | patatin |
Protein accession | YP_869037 |
Protein GI | 117919845 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0173142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.188155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAACAT CAACAGCATT AGTTCTCGGT GGCGGTGGCG CTCGGGCCGC CTATCAAGTG GGAGTGTTAA AAGCACTGGT CCAGCTTTAT CCGCGCAACC ATGGCGTGCC CTTTAAAATC ATTTGTGGCA CCTCTGCGGG CGCCATTAAT GGCACCTCCA TCGCCACCCA CGCCTCCTGC TTTCATTTAG GCGTCAAAAA ACTAGAGTGG GTTTGGCGCC ATTTTGAAAC GAGAAAGGTA TATCGCGCCT CCATCCCAGG CGTGTTAAGT CATTTAGCCA AGATGGCGCT CAAGGGCCTG CAAGATGATA AGGTGAATAC CGACGCGGGT AGCCTACTCG ATAACGAGCC TTTACGGCAT TTACTGAATG AACTTATCGA TTTTAAGAGA ATCGATCGCA ATATCCGCAA CGGTGCATTG ACGGCGCTCA GTGTCGATAC CTCGTGCTAT AACAACTCGC GCTCGGTGAC GTTTTTTCAA GCGGCCAGGG ATATTGAAAA CTGGACTCGC GCTAGGCGCA GCGGTGAGAG ACGGATGTTA AATACCGAAC ATCTTTTGGC AAGCTCGGCG ATCCCTATGG TGTTTCCGTC GATTAAACTC AATCAAGCTT ATTATGGTGA TGGCTCAGTC CACCAACTCG CGCCGCTCTC AAGCCCAATT CATTTAGGCG CCAATAAGCT ATTAGTAATC AACCTAGACA GTCCCCATAA GCATTTTCCT ATGGAGCTAG AATATCACCC GAAGACAGCG ACCATTGCTG GTCATCTGCT GGATACTATC TTTTCCGATA CCTTAAATAG CGATCTTGAG CGCCTAGAGC GGATTAATCA CACGCTGTCG CTTATTCCCG AAGAGAGCCG TACTCAACTG TCATTACATC CCATACAGAC CCTAGTGATA AAACCCAGTG AAGACTTAAG TAAAATCGCC GCCCGTTTCT ATGATGATAT GCCTTGGGCG ATTAAAACCT TACTGGGCTT TATCGGTATC GACAGGCAGT CAGACTCAAG TATTGTGTCC TATCTTTTGT TTGAAAAGTC CTACACCAGC GCCTTGATCG AATTAGGCTA TAAAGACGGT ATGGCTCAAA TGGATGAAAT AAAAGCATTT TTTAATCTGA CATGA
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Protein sequence | MPTSTALVLG GGGARAAYQV GVLKALVQLY PRNHGVPFKI ICGTSAGAIN GTSIATHASC FHLGVKKLEW VWRHFETRKV YRASIPGVLS HLAKMALKGL QDDKVNTDAG SLLDNEPLRH LLNELIDFKR IDRNIRNGAL TALSVDTSCY NNSRSVTFFQ AARDIENWTR ARRSGERRML NTEHLLASSA IPMVFPSIKL NQAYYGDGSV HQLAPLSSPI HLGANKLLVI NLDSPHKHFP MELEYHPKTA TIAGHLLDTI FSDTLNSDLE RLERINHTLS LIPEESRTQL SLHPIQTLVI KPSEDLSKIA ARFYDDMPWA IKTLLGFIGI DRQSDSSIVS YLLFEKSYTS ALIELGYKDG MAQMDEIKAF FNLT
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