Gene Shewana3_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1394 
Symbol 
ID4478991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1610032 
End bp1610820 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID639725949 
Producthypothetical protein 
Protein accessionYP_869034 
Protein GI117919842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.334795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0357874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCCT ATATAACACC TGTGGCTTTA CTGCTCAGTA CCTTGTCTTT ATCAACAGCC 
CAAGCAAATA TCCAACTTTA TGTCAGTATA TCTTCGACTA AAGAGCCGCT GGTACAAATA
ACCTATCCCA CGACAATCCG AGTTGGCCAA GCTGTACAAG ATGGTTTAGC ACAACTCCCC
CTTTATAATC AGAGTGCTAA AAGCGAAGAA ATACCGATTT ACTGGTTAGG TGCAGCTCTA
CTGGACATTC ACAATACAGC GGCACTGGAA ACGACTCGTC AGCAAGTGTT ACAAAAATTA
GCCAATATGG GCCAGCAGGC AGACAACAAT AGTCAGTATA TTGCTAAGCT CTCCAAGTTT
GCACAATTTC TGCGTAATAT AAAACTTGGA CAAAGAGTTA ATCAGCCATT AGATCTCGAT
TTAATTCGTA TTACCGATGC CTACAATCCC ATAATTGATG GTCAATTTTT ATTAGTGTTG
CCTCCACGCC CAAGCACAGT GACAGTGGTT GGTGCAGTAT CACAAACTGG TGAGCAAGCG
TGGCAATCTC AAACAAGTAG CAGAGAATAT CTTCAACAGG CTGGTTTATT GGAAAATGCT
GAAAATAGCT TTGTTTGGAT TATCCAACCC GATGGTAACG CTATTCGACA ACCCATTGCC
TATTGGAATC ATCAGGCCCA GGATATAGCT CCAGGCGCCA CACTCTTCGT TGAGTTTTCA
GGCCTTTTTG ATGACTATTC CACATTAAAC AACAACATCA TTGAATTACT CAAAAATCGG
GCTCTGTAA
 
Protein sequence
MRSYITPVAL LLSTLSLSTA QANIQLYVSI SSTKEPLVQI TYPTTIRVGQ AVQDGLAQLP 
LYNQSAKSEE IPIYWLGAAL LDIHNTAALE TTRQQVLQKL ANMGQQADNN SQYIAKLSKF
AQFLRNIKLG QRVNQPLDLD LIRITDAYNP IIDGQFLLVL PPRPSTVTVV GAVSQTGEQA
WQSQTSSREY LQQAGLLENA ENSFVWIIQP DGNAIRQPIA YWNHQAQDIA PGATLFVEFS
GLFDDYSTLN NNIIELLKNR AL