Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1391 |
Symbol | |
ID | 4478988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1606171 |
End bp | 1607109 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725946 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_869031 |
Protein GI | 117919839 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00918938 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTACAAT CATCCCTTCA CTTTGACTCA CTAATCCTTG ATATATCAAT GAGAAAAGGC ATTTTATTGG CGGGCGGGAC CGGTTCTCGC CTATATCCGA TGACACAGGT TGTATGTAAG CAATTATTGC CTATTTACGA TAAGCCAATG ATTTATTATC CACTTGTTAC CTTAATGCAG GCGGGCATAA AAGAGATTCT GATTATCTGT ACTCGCGCTG ATTTGCCTCT TTTTCAGGCA TTGCTTGGTG ATGGTCACTG TTGGGGCATT CAGCTTGAAT ATGCGGTACA GCCTTCTCCA AAGGGATTAG CCGAAGCACT TATTATCGGA GAGGCTTTTT TGGCGGGAGA GGCCTGTGCG TTGATTCTGG GCGATAACTT ATTTTACGGG CAACAACTGA GCACAAACTT GTATAGAGCT TCTCTACTCG AAGTGGGGGC GACCGTTTTT GGCTACCATG TGGCTAATCC GAATGCCTAC GGTGTTGTCG AATTTGATAT GAGCGGAAAA GCGATTTCTA TCGAAGAGAA ACCCCGAGTT GCGCGTTCTT CCTATGCTAT TCCTGGATTG TATTTCTTTG ATAATAGGGC TAGTGAGTGG GCTAAAAAAG TAATGCCTTC GGCGCGGGGC GAGTTGGAGA TCGTTGATCT AATCAATCAA TATCTTCTGC TGGGGGAATT GCAGGTAGAA ATAATGGGGC GGGGCACTGC TTGGCTCGAT ACGGGAACGC CGGATGCGAT GGCTGAAGCA ACACAATTTA TTGCTGCCAT AGAGAAACGC CAAGGGTTGA AAGTGAACTG CCCTGAAGAG GTTGCTTTTC ATTCTGGTTG GATAGATGCT GCGCAGCTTA CCGCTTTAGC ACAACCTTTG CTTAAAAGCG GTTATGGTGA GTATCTTTTG GGCTTATTAA ATAAGCAGGT GTTCAATGAA GTGCATTGA
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Protein sequence | MLQSSLHFDS LILDISMRKG ILLAGGTGSR LYPMTQVVCK QLLPIYDKPM IYYPLVTLMQ AGIKEILIIC TRADLPLFQA LLGDGHCWGI QLEYAVQPSP KGLAEALIIG EAFLAGEACA LILGDNLFYG QQLSTNLYRA SLLEVGATVF GYHVANPNAY GVVEFDMSGK AISIEEKPRV ARSSYAIPGL YFFDNRASEW AKKVMPSARG ELEIVDLINQ YLLLGELQVE IMGRGTAWLD TGTPDAMAEA TQFIAAIEKR QGLKVNCPEE VAFHSGWIDA AQLTALAQPL LKSGYGEYLL GLLNKQVFNE VH
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