Gene Shewana3_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1316 
Symbol 
ID4478830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1530732 
End bp1531157 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID639725871 
ProductFlgN family protein 
Protein accessionYP_868956 
Protein GI117919764 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.297845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA TAGCTAAACT GGTAGATCAA CAACACGCCC ATTTGGCTGT TCTTAAACAG 
ATTATTCTTA AGGAAAAAGG CGCTTTGGTT GACCAAAACG CCGATTTGCT TTTATCGCTT
GCGGAGCAAA AATCAACATG CCTGCAAGAA CTCAAGGCCA ACGATGACTT ACTGGCCAAT
CACAGCGATA AATCCTTACT CTCCTCGCAA GTAGAACTAT CCCATAAAAT GGCCGCCGTA
AAAGAGGCCC TTGCCGAATG TAAGGATCTT AACGCTCAAA ATGCCAGTCT CATCGAGATG
AATTTGGCGA GTCTAAACCG TTTTGCCCAA GCCTTACAGG CGAGCCGAAA CGCGACCACT
CTGACTTATA ACGATAAAGG CAGAACTTCG ACCCTTTCTA GCTTAGGCAA TGATTTAAAA
GCATAA
 
Protein sequence
MTEIAKLVDQ QHAHLAVLKQ IILKEKGALV DQNADLLLSL AEQKSTCLQE LKANDDLLAN 
HSDKSLLSSQ VELSHKMAAV KEALAECKDL NAQNASLIEM NLASLNRFAQ ALQASRNATT
LTYNDKGRTS TLSSLGNDLK A