Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1295 |
Symbol | |
ID | 4479869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1506628 |
End bp | 1509708 |
Gene Length | 3081 bp |
Protein Length | 1026 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725849 |
Product | acriflavin resistance protein |
Protein accession | YP_868935 |
Protein GI | 117919743 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAG CCTTCGTCGA AAATGGTCGC TTAGTCAGCC TAGTGATCGC CCTACTGCTG GTCGCGGGAT TTGGCGCAAT GTCCAGTTTG CCACGCACCG AAGATCCACA CATCACCAAC CGATTTGCGT CTGTCATCAC CCCTTATCCC GGCGCCTCCG CCGAGCGGGT CGAGGCGCTT GTCACCGAAG TATTAGAGAA TCAATTGCGT CGACTTGAGG AAATTAAGCT TATTCAATCC ACCTCAAGAC CCGGTATTTC GGTGATCCAG TTGGAGCTTA AAGATACCGT CACTGACACA GATCCTGTCT GGTCTAGGGC GCGGGATCTA TTAGCCGATG CCAGAAACAC CCTCCCCGAT GGCATACAAA CACCGACCTT AGACGATCAA GTCGGCTACG CCTACACCGC CATTTTAAGC CTAGTGTGGA ACGATAGCAG TCAACCGCGG GTGGATATGC TCAACCGCTA CGCCAAGGAA TTACAGAGCA GGCTCAGGCT CTTATCCGGC ACCGACTTCG TTAAACTTTA CGGCGCGCCC GAGGAGGAAA TCCTGGTTCA GCTCGATGGC TATAAGATGA GCCAATTGCA ATTAACGCCG GGAACCATAG CGAAAATCTT AAGCAGCGCC GACAGTAAAA TTGCCGCGGG CGAGATTAAT AACAATCACT TTCGCGCCCT CGTCGAAGTC TCGGGTGAGC TCGATTCCCA AAGCCGTATT CGCCAAGTGC CACTCAAGGT GGATGCGCAG GGACAAATTA TTCGTTTAGG GGATATCGCC CACATCAGCC GTCAACCTAA AACCCCCGCT GACAGTATCG CCCTAGTCGA TGGCGAGCAG GGCGTGTTTG TTGCGGCGCG CATGCTCAAC AATACCCGCG TCGATATCTG GCAAGGACAA GTCAAACAGC TGGTCGATGA GTTCAATCAG GAGCTGCCGG CCAATATCAA AGTGCAATGG CTTTTTGAGC AAAACAGCTA CACCAGCGAA CGTCTCGGCG GATTAATCGT CAACCTATTA CAAGGGTTTG TGATTATTCT GGCGGTCTTA CTGCTGACCT TAGGCTTAAG AAACGCGATT ATCGTTGCGC TGTCACTCCC CCTGACCGCC CTCTTCACCT TGGCCTGTAT GAAATATATC GGCCTACCCA TTCATCAAAT GTCGGTCACA GGACTAGTCG TCGCCCTTGG GATCATGGTG GACAATGCCA TTGTGATCGT CGATGCTATC GCCCAGCGTC GCCAGCAGGG GATGAGTCGC TTAAGCGCGG TAAGTGAGAC CTTACATCAC CTCTGGCTAC CCTTAGCCGG GTCAACCATT ACCACAATTT TAGCCTTCGC CCCTATCGTG CTGATGCCGG GTGCGGCGGG GGAATTTGTT GGTGGCATAG CCATGTCGGT GATGTTTGCC CTGCTGGGTT CCTATGTGAT TTCCCATACT TTGATCGCGG GCCTTGCGGG ACGCTTTAGC CTCGAAGGTA AACATCCTGT CTGGTACCAA CATGGCATCA ACGTGCCTTT AGTAAGTGGT TACTTTCAAG CAAGCCTAAG ATTTGCGTTA AATCGCCCAT TACTGAGCGC TACGTTTATC GGGATAATTC CCCTGCTAGG GTTTTATGCT TCCGGCAAAA TGACTGAGCA GTTTTTCCCG CCGTCGGATC GGGATATGTT CCAAATTGAG CTGTATCTCG CGCCCCATGT CAGCCTCGAA AACACCTTAA ACCAAGTGCA GTTGATGGAT AAGCAATTGC ATCAAATCGA GGGCATCATC CAAGTCGATT GGGTTGTAGG CGGCAATACG CCTTCGTTTT ATTACAACCT AACTCAGCGC CAACAGGGAG CCACCAACTA TGCTCAGGCC ATGGTGAAAG CCAGTGACTT TGAGCGCGCT AACGCCCTCA TACCTGAGCT GCAGCAAACC TTAGATAAGG CCTTTCCCGA AGCACAGGTG TTAGTGCGTA AACTTGAGCA AGGCCCGCCC TTTAATGCGC CAGTCGAGTT AATGATTTTT GGCCCTAACC TTGAAACCTT ACGCTCACTC GGCGATGAAG TGCGCAATAT CCTAGCCGCC ACGCCCGATG TACTTCATAC CCGCGCAACT CTAAGCGCTG GCGCTCCTAA GGTGTGGCTA CAAGTGAATG AAGATGCGAG TTTGATCAGT GGATTAACTC TGACGGATAT CGCCAGACAA GTTCAAATGG CGACTACGGG CGTTATCGGC GGCAGTGTGC TCGAACAGAC AGAGTCTTTG CCGATTCGAG TCCGTTTGGG CGACACCAGC CGCGAGCAAG CCAGTCGCCT CTCAGAAATT CAGCTTGTGA CCCCCTCAGG CACAGCCGTG CCTTTGTCTG CGCTGTCCCA CAATGAGGTG CAAGTCAGTC GCGGGGCGAT CCCTAGGCGT AATGGTCAAC GCGTCAACAC GATTGAAGCC TATATCGTCA GCGGCGTATT GCCCGCTCAA GTATTAAACG ATGTGAAAGC TAAAGTCGCG GCGATTTCGC TCCCTGCGGG TTATCGAATT GAAATCGGTG GTGAAAGCGC TAAACGTAAT GAGGCGGTCG GCAATCTGCT CTCCAATCTG ATTTTGGTCG TTACCCTGCT GCTGGCCACT GTCGTCTTGT CCTTTAACTC CTTTAGGCTT ACAGCGATTA TTTTACTGAG CGCATTACAG TCGGCGGGGC TTGGGTTACT TGCGGTGTAT GTGTTTGGTT ATCCCTTTGG CTTTCCAGTC ATCATCGCCC TACTCGGCCT AATGGGGCTT GCGATCAACG CGGCGATTGT GATTTTGGCC GAGCTGGAAG ATACCGACAA TGCCCGAGCG GGTGATAAAG AGGTGATCAT CACCACGGTC AGCAGCTGCG GTCGTCATAT CAGTTCGACC ACTATCACCA CGGTCGGCGG GTTTATTCCG CTGATTATTG CAGGTGGTGG CTTCTGGCCT CCCTTTGCCA TCGCAATTGC CGGCGGGACG TTACTCACGA CGTTGCTGTC GCTCGTCTGG GTGCCAACCA TGTATCTGTT GCTGATGAAA ACGCGCCGCA CGGCTCCAAC ACCAGCGTTA TCGTCTCAAA TCGCATCATG A
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Protein sequence | MIKAFVENGR LVSLVIALLL VAGFGAMSSL PRTEDPHITN RFASVITPYP GASAERVEAL VTEVLENQLR RLEEIKLIQS TSRPGISVIQ LELKDTVTDT DPVWSRARDL LADARNTLPD GIQTPTLDDQ VGYAYTAILS LVWNDSSQPR VDMLNRYAKE LQSRLRLLSG TDFVKLYGAP EEEILVQLDG YKMSQLQLTP GTIAKILSSA DSKIAAGEIN NNHFRALVEV SGELDSQSRI RQVPLKVDAQ GQIIRLGDIA HISRQPKTPA DSIALVDGEQ GVFVAARMLN NTRVDIWQGQ VKQLVDEFNQ ELPANIKVQW LFEQNSYTSE RLGGLIVNLL QGFVIILAVL LLTLGLRNAI IVALSLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRQQGMSR LSAVSETLHH LWLPLAGSTI TTILAFAPIV LMPGAAGEFV GGIAMSVMFA LLGSYVISHT LIAGLAGRFS LEGKHPVWYQ HGINVPLVSG YFQASLRFAL NRPLLSATFI GIIPLLGFYA SGKMTEQFFP PSDRDMFQIE LYLAPHVSLE NTLNQVQLMD KQLHQIEGII QVDWVVGGNT PSFYYNLTQR QQGATNYAQA MVKASDFERA NALIPELQQT LDKAFPEAQV LVRKLEQGPP FNAPVELMIF GPNLETLRSL GDEVRNILAA TPDVLHTRAT LSAGAPKVWL QVNEDASLIS GLTLTDIARQ VQMATTGVIG GSVLEQTESL PIRVRLGDTS REQASRLSEI QLVTPSGTAV PLSALSHNEV QVSRGAIPRR NGQRVNTIEA YIVSGVLPAQ VLNDVKAKVA AISLPAGYRI EIGGESAKRN EAVGNLLSNL ILVVTLLLAT VVLSFNSFRL TAIILLSALQ SAGLGLLAVY VFGYPFGFPV IIALLGLMGL AINAAIVILA ELEDTDNARA GDKEVIITTV SSCGRHISST TITTVGGFIP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYLLLMK TRRTAPTPAL SSQIAS
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