Gene Shewana3_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1295 
Symbol 
ID4479869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1506628 
End bp1509708 
Gene Length3081 bp 
Protein Length1026 aa 
Translation table11 
GC content53% 
IMG OID639725849 
Productacriflavin resistance protein 
Protein accessionYP_868935 
Protein GI117919743 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG CCTTCGTCGA AAATGGTCGC TTAGTCAGCC TAGTGATCGC CCTACTGCTG 
GTCGCGGGAT TTGGCGCAAT GTCCAGTTTG CCACGCACCG AAGATCCACA CATCACCAAC
CGATTTGCGT CTGTCATCAC CCCTTATCCC GGCGCCTCCG CCGAGCGGGT CGAGGCGCTT
GTCACCGAAG TATTAGAGAA TCAATTGCGT CGACTTGAGG AAATTAAGCT TATTCAATCC
ACCTCAAGAC CCGGTATTTC GGTGATCCAG TTGGAGCTTA AAGATACCGT CACTGACACA
GATCCTGTCT GGTCTAGGGC GCGGGATCTA TTAGCCGATG CCAGAAACAC CCTCCCCGAT
GGCATACAAA CACCGACCTT AGACGATCAA GTCGGCTACG CCTACACCGC CATTTTAAGC
CTAGTGTGGA ACGATAGCAG TCAACCGCGG GTGGATATGC TCAACCGCTA CGCCAAGGAA
TTACAGAGCA GGCTCAGGCT CTTATCCGGC ACCGACTTCG TTAAACTTTA CGGCGCGCCC
GAGGAGGAAA TCCTGGTTCA GCTCGATGGC TATAAGATGA GCCAATTGCA ATTAACGCCG
GGAACCATAG CGAAAATCTT AAGCAGCGCC GACAGTAAAA TTGCCGCGGG CGAGATTAAT
AACAATCACT TTCGCGCCCT CGTCGAAGTC TCGGGTGAGC TCGATTCCCA AAGCCGTATT
CGCCAAGTGC CACTCAAGGT GGATGCGCAG GGACAAATTA TTCGTTTAGG GGATATCGCC
CACATCAGCC GTCAACCTAA AACCCCCGCT GACAGTATCG CCCTAGTCGA TGGCGAGCAG
GGCGTGTTTG TTGCGGCGCG CATGCTCAAC AATACCCGCG TCGATATCTG GCAAGGACAA
GTCAAACAGC TGGTCGATGA GTTCAATCAG GAGCTGCCGG CCAATATCAA AGTGCAATGG
CTTTTTGAGC AAAACAGCTA CACCAGCGAA CGTCTCGGCG GATTAATCGT CAACCTATTA
CAAGGGTTTG TGATTATTCT GGCGGTCTTA CTGCTGACCT TAGGCTTAAG AAACGCGATT
ATCGTTGCGC TGTCACTCCC CCTGACCGCC CTCTTCACCT TGGCCTGTAT GAAATATATC
GGCCTACCCA TTCATCAAAT GTCGGTCACA GGACTAGTCG TCGCCCTTGG GATCATGGTG
GACAATGCCA TTGTGATCGT CGATGCTATC GCCCAGCGTC GCCAGCAGGG GATGAGTCGC
TTAAGCGCGG TAAGTGAGAC CTTACATCAC CTCTGGCTAC CCTTAGCCGG GTCAACCATT
ACCACAATTT TAGCCTTCGC CCCTATCGTG CTGATGCCGG GTGCGGCGGG GGAATTTGTT
GGTGGCATAG CCATGTCGGT GATGTTTGCC CTGCTGGGTT CCTATGTGAT TTCCCATACT
TTGATCGCGG GCCTTGCGGG ACGCTTTAGC CTCGAAGGTA AACATCCTGT CTGGTACCAA
CATGGCATCA ACGTGCCTTT AGTAAGTGGT TACTTTCAAG CAAGCCTAAG ATTTGCGTTA
AATCGCCCAT TACTGAGCGC TACGTTTATC GGGATAATTC CCCTGCTAGG GTTTTATGCT
TCCGGCAAAA TGACTGAGCA GTTTTTCCCG CCGTCGGATC GGGATATGTT CCAAATTGAG
CTGTATCTCG CGCCCCATGT CAGCCTCGAA AACACCTTAA ACCAAGTGCA GTTGATGGAT
AAGCAATTGC ATCAAATCGA GGGCATCATC CAAGTCGATT GGGTTGTAGG CGGCAATACG
CCTTCGTTTT ATTACAACCT AACTCAGCGC CAACAGGGAG CCACCAACTA TGCTCAGGCC
ATGGTGAAAG CCAGTGACTT TGAGCGCGCT AACGCCCTCA TACCTGAGCT GCAGCAAACC
TTAGATAAGG CCTTTCCCGA AGCACAGGTG TTAGTGCGTA AACTTGAGCA AGGCCCGCCC
TTTAATGCGC CAGTCGAGTT AATGATTTTT GGCCCTAACC TTGAAACCTT ACGCTCACTC
GGCGATGAAG TGCGCAATAT CCTAGCCGCC ACGCCCGATG TACTTCATAC CCGCGCAACT
CTAAGCGCTG GCGCTCCTAA GGTGTGGCTA CAAGTGAATG AAGATGCGAG TTTGATCAGT
GGATTAACTC TGACGGATAT CGCCAGACAA GTTCAAATGG CGACTACGGG CGTTATCGGC
GGCAGTGTGC TCGAACAGAC AGAGTCTTTG CCGATTCGAG TCCGTTTGGG CGACACCAGC
CGCGAGCAAG CCAGTCGCCT CTCAGAAATT CAGCTTGTGA CCCCCTCAGG CACAGCCGTG
CCTTTGTCTG CGCTGTCCCA CAATGAGGTG CAAGTCAGTC GCGGGGCGAT CCCTAGGCGT
AATGGTCAAC GCGTCAACAC GATTGAAGCC TATATCGTCA GCGGCGTATT GCCCGCTCAA
GTATTAAACG ATGTGAAAGC TAAAGTCGCG GCGATTTCGC TCCCTGCGGG TTATCGAATT
GAAATCGGTG GTGAAAGCGC TAAACGTAAT GAGGCGGTCG GCAATCTGCT CTCCAATCTG
ATTTTGGTCG TTACCCTGCT GCTGGCCACT GTCGTCTTGT CCTTTAACTC CTTTAGGCTT
ACAGCGATTA TTTTACTGAG CGCATTACAG TCGGCGGGGC TTGGGTTACT TGCGGTGTAT
GTGTTTGGTT ATCCCTTTGG CTTTCCAGTC ATCATCGCCC TACTCGGCCT AATGGGGCTT
GCGATCAACG CGGCGATTGT GATTTTGGCC GAGCTGGAAG ATACCGACAA TGCCCGAGCG
GGTGATAAAG AGGTGATCAT CACCACGGTC AGCAGCTGCG GTCGTCATAT CAGTTCGACC
ACTATCACCA CGGTCGGCGG GTTTATTCCG CTGATTATTG CAGGTGGTGG CTTCTGGCCT
CCCTTTGCCA TCGCAATTGC CGGCGGGACG TTACTCACGA CGTTGCTGTC GCTCGTCTGG
GTGCCAACCA TGTATCTGTT GCTGATGAAA ACGCGCCGCA CGGCTCCAAC ACCAGCGTTA
TCGTCTCAAA TCGCATCATG A
 
Protein sequence
MIKAFVENGR LVSLVIALLL VAGFGAMSSL PRTEDPHITN RFASVITPYP GASAERVEAL 
VTEVLENQLR RLEEIKLIQS TSRPGISVIQ LELKDTVTDT DPVWSRARDL LADARNTLPD
GIQTPTLDDQ VGYAYTAILS LVWNDSSQPR VDMLNRYAKE LQSRLRLLSG TDFVKLYGAP
EEEILVQLDG YKMSQLQLTP GTIAKILSSA DSKIAAGEIN NNHFRALVEV SGELDSQSRI
RQVPLKVDAQ GQIIRLGDIA HISRQPKTPA DSIALVDGEQ GVFVAARMLN NTRVDIWQGQ
VKQLVDEFNQ ELPANIKVQW LFEQNSYTSE RLGGLIVNLL QGFVIILAVL LLTLGLRNAI
IVALSLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRQQGMSR
LSAVSETLHH LWLPLAGSTI TTILAFAPIV LMPGAAGEFV GGIAMSVMFA LLGSYVISHT
LIAGLAGRFS LEGKHPVWYQ HGINVPLVSG YFQASLRFAL NRPLLSATFI GIIPLLGFYA
SGKMTEQFFP PSDRDMFQIE LYLAPHVSLE NTLNQVQLMD KQLHQIEGII QVDWVVGGNT
PSFYYNLTQR QQGATNYAQA MVKASDFERA NALIPELQQT LDKAFPEAQV LVRKLEQGPP
FNAPVELMIF GPNLETLRSL GDEVRNILAA TPDVLHTRAT LSAGAPKVWL QVNEDASLIS
GLTLTDIARQ VQMATTGVIG GSVLEQTESL PIRVRLGDTS REQASRLSEI QLVTPSGTAV
PLSALSHNEV QVSRGAIPRR NGQRVNTIEA YIVSGVLPAQ VLNDVKAKVA AISLPAGYRI
EIGGESAKRN EAVGNLLSNL ILVVTLLLAT VVLSFNSFRL TAIILLSALQ SAGLGLLAVY
VFGYPFGFPV IIALLGLMGL AINAAIVILA ELEDTDNARA GDKEVIITTV SSCGRHISST
TITTVGGFIP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYLLLMK TRRTAPTPAL
SSQIAS