| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1082 |
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| Symbol | |
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| ID | 4476417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1269794 |
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| End bp | 1270972 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639725625 |
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| Product | major facilitator transporter |
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| Protein accession | YP_868723 |
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| Protein GI | 117919531 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.499902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AACCACCACT CTGGCTGTGC GTACTCTTGA TGATGTTTCC GCAAATTATG
GAAACCATCT ATAGCCCTGC GTTGCCTAAT ATTGCAGAAA ATTTTGCGGT GTCTGTTACC
AGCGCCTCGC AGACTTTATC TGTGTACTTT ATCGCTTTTG CTGTAGGCGT ATTTTGCTGG
GGTCGTTTAG CCGACATCAT TGGTCGCCGC AATGCCATGC TTGCGGGCTT ACTCTGTTAT
GCCATTGGTT CCGCATGCGC GTTGATGATT AGCGACTTTA CCCTGTTGTT GTTCGCTCGG
GTATTATCGG CCTTTGGTGC AGCAGTGGGT TCTGTCATCA CTCAAACCAT GATGCGTGAC
AGTTACAACG GGGAGGAACT CGCGAAAGTC TTTTCGGTGA TGGGCATGTC TCTTGGGATT
AGTCCCATTA TCGGATTGCT ATTGGGGAGC ATCCTCAGTG CTTATTGGGG ATATCAAGGG
GTATTTGTCG CCCTGATGGT TTCTGCCATT GTGTTGTTGT TTTTGTCGGT AAAATCTTTG
CCCGAAACCA AGCCTGAACA CACTCAAAAA ATCGCGATAG TTGAATTAGC TATCAAGATG
CTTACCGACA TTGGGATAAT TAAAAATACT CTGCTGGTGG CCTCATTTAA CTTGATGTGG
TTTAGCTACT TTTCGCTGGC ACCATTTATG TTTGAGGCGC GAGGATTGTC GACGCTTGCC
TTCGGTGCCA GTGGGTTGTT ATTGGGCTTT GGCGCATTCC TTGGCAGTTA TTTTAATAAA
CTATTGCTGG GTAGAGGCTA TTCCTGTGCG CTATTAGTGC GGTTAGCAAG CCTTATGGCA
CTATTCGGAG GACTCGGTAT TTGGCTGTTC CAATCGACTA ATATTGGCTT GAATAATGTT
TATTTCTTAC TACCCATGCT GTTGATTGTG ATTGCTTATG GGATCGCGAT TCCTAATATC
CTGAGCTCGG CGCTGGCAAA CTACCGCGCT TATGCAGGTT CCGCGGGTGC ACTGTTTGGA
CTGTTTTATT ACATTCTGTT GGGGCTAGGT TTAGGCGGTG CGGGCATGGT AAGCCATCTT
GGGGGCGTTA TTACCTTAGC TGCACTGCTA TGTGTTGGGC TTGGATATGC GGGTTTGGCA
GGCAGGACAG TGCTAAGAGG GAAGTCGTCT CGAGCGTAA
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| Protein sequence | MKIKPPLWLC VLLMMFPQIM ETIYSPALPN IAENFAVSVT SASQTLSVYF IAFAVGVFCW
GRLADIIGRR NAMLAGLLCY AIGSACALMI SDFTLLLFAR VLSAFGAAVG SVITQTMMRD
SYNGEELAKV FSVMGMSLGI SPIIGLLLGS ILSAYWGYQG VFVALMVSAI VLLFLSVKSL
PETKPEHTQK IAIVELAIKM LTDIGIIKNT LLVASFNLMW FSYFSLAPFM FEARGLSTLA
FGASGLLLGF GAFLGSYFNK LLLGRGYSCA LLVRLASLMA LFGGLGIWLF QSTNIGLNNV
YFLLPMLLIV IAYGIAIPNI LSSALANYRA YAGSAGALFG LFYYILLGLG LGGAGMVSHL
GGVITLAALL CVGLGYAGLA GRTVLRGKSS RA
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