| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1077 |
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| Symbol | |
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| ID | 4476412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1262443 |
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| End bp | 1263681 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725620 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_868718 |
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| Protein GI | 117919526 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTA ACCAACCTTT ACGGATATTG ATGTTGACTG CCGTGGCGGC TTTTGTCCTT
TCGGCCTGTG GTGAACCCGA AGCCCAGCAG GGGCAAGCAC CGGGTGCACC TAAGGTCGAT
GTTGCGCAGG TATTGCATGA GCGCGTTACC GAGTGGGATG AATTTACCGG CCGTTTGCAG
GCGCCAGAGA GTGTGACCTT AGTGCCACGC GTATCTGGCT ATATCGCGTC GGTAAACTTT
AAAGAAGGCG CCTTAGTGAA AAAAGGCGAT GTGCTATTCC ATATCGATGC GAGTGTGTTC
GAAGCGGAAG TGGCCCGGTT AAGAGCAGAT CTTGCTAGCG CGCTCTCTGC TGAGCAACTG
GCCACTAACG ACTTAGAACG TGCCCGTAAA CTCTTTGCCC AAAAGGCGGT ATCTGCAGAA
TTACTCGATA CCCGTGAGTC TAACAAACGT CAAACCACGG CGGCCGTAGC CTCTGTAAAA
GCTGCGCTGC TGCGCGCTGA GTTGGACTTG GATTACACCC AAGTGCGCGC GCCGATTGAT
GGCCGAGCCT CCTACGCCAA TGTCACTGCG GGTAACTATG TGTCTGCGGG GCAGAGTGTG
TTAACCAGCT TAGTATCGAC CGCCAGCATG TATGCCTACT TCGATGTGGA TGAGCAAACC
TATCTGAAAT ACGTCAAGTT AACCGCCGAG AAAAAGCGTA AAGACCCTCG TGCCGGCGAC
AATCCCGTGT ATATGGCGCT GGCTAACGAG CGCGAATATC AACACATAGG CCTAGTGGAC
TTTGTCGATA ACTCGATGGA TAGACAGACG GGCACTATTC GAGTACGCGC CACGTTTAGC
AATGAAGACA ACAGCTTGCT CCCAGGTCTG TTCGCCAGAT TACGTACCGC CGGTAGCGGC
GCCTATGACG GCATCTTAAT TGACGATAAA GCCGTGGGCA CGGATCTGAA CAACAAGTTC
GTGTTAGTGG TGGCAAACGA TGGCACTGTT GAGTATCGCG GCGTCACCCT AGGTGAAAAA
GTTCAAGGTT TACGCATTGT TAAGCAAGGT TTAGCGGCAG ACGACAAAAT CGTCGTCAAT
GGCATGCAAA GGGTTCGTCC TAAGATGCAA ATTGAGCCAC ACCTGGTTGA TATGGCCGAC
AGCGAACAGC TAGAGGCGCT TCGTCAAGCT CAATTACTGC TTGATAAACA TCAAGAAAAT
ATCACCACTC CAGACGTTGA AGTAGCGAGC CGCGGTTAA
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| Protein sequence | MKSNQPLRIL MLTAVAAFVL SACGEPEAQQ GQAPGAPKVD VAQVLHERVT EWDEFTGRLQ
APESVTLVPR VSGYIASVNF KEGALVKKGD VLFHIDASVF EAEVARLRAD LASALSAEQL
ATNDLERARK LFAQKAVSAE LLDTRESNKR QTTAAVASVK AALLRAELDL DYTQVRAPID
GRASYANVTA GNYVSAGQSV LTSLVSTASM YAYFDVDEQT YLKYVKLTAE KKRKDPRAGD
NPVYMALANE REYQHIGLVD FVDNSMDRQT GTIRVRATFS NEDNSLLPGL FARLRTAGSG
AYDGILIDDK AVGTDLNNKF VLVVANDGTV EYRGVTLGEK VQGLRIVKQG LAADDKIVVN
GMQRVRPKMQ IEPHLVDMAD SEQLEALRQA QLLLDKHQEN ITTPDVEVAS RG
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