Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1050 |
Symbol | |
ID | 4479395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1229753 |
End bp | 1230145 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725593 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_868691 |
Protein GI | 117919499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.418189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA AAGAAGTCGT GATTGATGAA AGACGAAAGT TCTCGCGGAT CCTCTTTGCC GCTAGCGCAT CGGTACACCA AGGCGATAAA CAGTGGCAAA CCACCATACT CGACCTCAGC CTAAATGGCG CACTGGTGGA CGAACCTGCC GGATTTAGCC ATACGGATGC GCCTATCACC CTCAGTTTTA CCCTACCGGG CTCGGATATT GAGCTGCAAA TGGAAACCGA GTTAGTGCAT CAACGCAACC AACAGCTGGG GCTCAAGTGT AAATTTATCG ATGTCGACAG CATCAGCCAC CTCAAACGCA TCGTTGAGCT AAATCTAGGC GATGCGTCGA TACTGAATCG TGAATTAGCG CTATTTATCG AGAAGCACAA CAGCGCCGAT TAA
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Protein sequence | MNNKEVVIDE RRKFSRILFA ASASVHQGDK QWQTTILDLS LNGALVDEPA GFSHTDAPIT LSFTLPGSDI ELQMETELVH QRNQQLGLKC KFIDVDSISH LKRIVELNLG DASILNRELA LFIEKHNSAD
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