Gene Shewana3_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1050 
Symbol 
ID4479395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1229753 
End bp1230145 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content49% 
IMG OID639725593 
Producttype IV pilus assembly PilZ 
Protein accessionYP_868691 
Protein GI117919499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.418189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA AAGAAGTCGT GATTGATGAA AGACGAAAGT TCTCGCGGAT CCTCTTTGCC 
GCTAGCGCAT CGGTACACCA AGGCGATAAA CAGTGGCAAA CCACCATACT CGACCTCAGC
CTAAATGGCG CACTGGTGGA CGAACCTGCC GGATTTAGCC ATACGGATGC GCCTATCACC
CTCAGTTTTA CCCTACCGGG CTCGGATATT GAGCTGCAAA TGGAAACCGA GTTAGTGCAT
CAACGCAACC AACAGCTGGG GCTCAAGTGT AAATTTATCG ATGTCGACAG CATCAGCCAC
CTCAAACGCA TCGTTGAGCT AAATCTAGGC GATGCGTCGA TACTGAATCG TGAATTAGCG
CTATTTATCG AGAAGCACAA CAGCGCCGAT TAA
 
Protein sequence
MNNKEVVIDE RRKFSRILFA ASASVHQGDK QWQTTILDLS LNGALVDEPA GFSHTDAPIT 
LSFTLPGSDI ELQMETELVH QRNQQLGLKC KFIDVDSISH LKRIVELNLG DASILNRELA
LFIEKHNSAD