| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1048 |
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| Symbol | |
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| ID | 4479393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1225828 |
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| End bp | 1228200 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725591 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_868689 |
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| Protein GI | 117919497 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.023963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAG ATAACCATAA TGCACTCATA GAACAGCTCA AGCCGCTACT CATGGAACCG
AATTTCCAAG AGATTTTTCA GCAGCTGACT GCCGATGAAA ACAATTCGAC CCGTTTTCTG
TTGAAAATGG AGTTGAATCG TTTGGCTTCG CCCTGCACCC GGATTATCGA TCTTAGGGAC
AAGTCTGAGT TGCCCTGCAC CGAAGTCATG CTTGGCCAGC AGCGCCATTT TCTCGATGAG
CCCGCCAAGC ATAGTCTGCA AGCGGCTATG TCTTTATACC GCAATAAGTA CACCTTAGGG
GTGTATGAAT ACGTCATCAA TGCCCATCAA CAGCGGCGAC AAAAGCTACG TCAGGTGACG
CAACAACCAG ATGGCATCGA ACCCGAACCT TTTATGGTGC CCGGTGTGGT GCTCGGCAGT
TATTTTAATC GCGCTGAAGA ACGGATGAAT TACAGTATCC GCATTGCGGT GTCGCAACCC
GGACGAACCG AAATGCCGGG GATCACCGTC GATTTATCGG TGGGCGGTGC GCGTATTCGC
TTGGCGGCGA ATCATCCCTT CGATCTCGAC AAGCCCCTCA AGGTCAAACT GCTCGAGCTT
AGTGAAGAAT ATTACTACCC CGATTTACAA CTCGGGGTCG ATTATCAGAT TGTCGATAGC
CAAACCAATG GTGAATTCAT TTGGTTACGC TTACGCCGGA TTGGTGGCAC GGATGCCCTA
GGTGAAATGC TGGGCAACTT AATCCGAGGC TACAAGCTCC GTTATAAACT GGATGTGAAT
GATGTCCTAG TGACGGCCTC TGGTCTGGGG TTCGAGCGCC ATTACCTACC GCATCTGCCG
CATTTGCCTT TGTTTCTCAG TCAGCAGTCC CAATCCATCA GCCATATGCT GCTGAGCCGC
GACAATCAGC AGATAGTGCA TTATTTTCAG GATGAGAATG ATATCAGCCA ATTGCCCGCC
ATGCTGACGC CAGCAAGACT CTCGGCGCTG GTCAATCATC CCGAAAACCC CGATTACGGA
TTGTTTTTTA GCTTTACCTA CAACGCCCAA GGCTCACTGT ATTTTTACTC GGCCACCTTA
GCCGAATTAA AAGCCAAGGG CATGACGTCT TTATTCCTCG GTTTTGCCTC AACGAAACCG
AGCTGGCGTA TTTTCAAACT CATCCCAGAT AAGATTTACC ATGCGAAAGG TTATCGCCGT
GCGACCTTAC CGGGGGATGA TGCTAAGTAC AGCCCGCTGG TGGAACAGCA ATTGTCCCAG
TTCAGCCATA TGCTGCAACT AATAGACCTT ACCAATGAGG ATGAAAGGGC TAGTTACAAG
GCCTGGCAGG ACGATAGCAA TGCCAATGCG CTCAAAGCCT TTGGCCAACA GCGCCTGACG
GCACACCAAA TCAAGCCGGT TTCGATGCAA TTTAGTGAGC GTCGACAGGA AGCGCGTTTT
GCCTTCAAAA CCTTAGTTAA TGTGTCACAG GGAGCCTTAA AAGCGACGGG GATAAGCTTA
GATATTTCTG GTCGAGGCAT GCAGCTGACT CTGGATAATC CAACTGAGTT TGCCACCAAC
AAGCCAATAA TGATCAGTTT GCCTAAGTTG CAGACCATTG CCGGTAAAAC CCAACTGGAT
AATTTACCCT ACCGCCTAGT GCGTACCCGT AAAAATGGCG TGACACTGCA TTTAGCCGCA
GTGATGGGCC ATACGCCCCA TGTTGGCGTG GAGTTTTTAA ATAAACTGAT CGCCCATAAC
CGTGAAAAAC TCGAACAGCT AACCGAGAAC AACAGCGAGA TAAAAGAGCT GGCCGATGGT
TTGAAAAACA TTCTATTACG CGAGCTGCAT TCGGTACCCT ACTTTGTTGA AAAAACAACA
AAATCTGCAC AGGTCGCCTG TTTAGGGGTC AGCACTGAGC ATGATGAGAT CAGCGATATT
TTTGCCGCTG GCTCCTCGGA TACCCTGCAA TATAATCTCG CGCCGCTACT AAAAGATGGA
TTCTTTAAAC GGGATATTCT CGATCCTATC CGCCAAATGA AGCCACAACA GGATATGGAT
TTTATTGAGG TATTTATCCA ATTGACCCGC CAGTCCCGCG GTCAATTCCA TTTAAAATGT
GTTCCCGCCA CCGAGCTTGG AGATGCGCAG GCCAAAATCG CCTTTATCAA CCAAAGTAAA
CTGGCGGGAC GCTTTATGGC GCTGCGGATT TACCGTGGTG CGACTGAGAA ACCGGATATG
GGTTATCTGC GCCGCGAATT GGAATACATC AACATCCACG CCAACCACAG AGCGAAACAA
CTCGAGGAAC AACTCTGGCG GATTATCGGT GTTGGTGAGC TACTCGATAT CACCCAAGAG
GTAGAGCTGC GCTACCCTGC TCTGCAAAAA TAA
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| Protein sequence | MSLDNHNALI EQLKPLLMEP NFQEIFQQLT ADENNSTRFL LKMELNRLAS PCTRIIDLRD
KSELPCTEVM LGQQRHFLDE PAKHSLQAAM SLYRNKYTLG VYEYVINAHQ QRRQKLRQVT
QQPDGIEPEP FMVPGVVLGS YFNRAEERMN YSIRIAVSQP GRTEMPGITV DLSVGGARIR
LAANHPFDLD KPLKVKLLEL SEEYYYPDLQ LGVDYQIVDS QTNGEFIWLR LRRIGGTDAL
GEMLGNLIRG YKLRYKLDVN DVLVTASGLG FERHYLPHLP HLPLFLSQQS QSISHMLLSR
DNQQIVHYFQ DENDISQLPA MLTPARLSAL VNHPENPDYG LFFSFTYNAQ GSLYFYSATL
AELKAKGMTS LFLGFASTKP SWRIFKLIPD KIYHAKGYRR ATLPGDDAKY SPLVEQQLSQ
FSHMLQLIDL TNEDERASYK AWQDDSNANA LKAFGQQRLT AHQIKPVSMQ FSERRQEARF
AFKTLVNVSQ GALKATGISL DISGRGMQLT LDNPTEFATN KPIMISLPKL QTIAGKTQLD
NLPYRLVRTR KNGVTLHLAA VMGHTPHVGV EFLNKLIAHN REKLEQLTEN NSEIKELADG
LKNILLRELH SVPYFVEKTT KSAQVACLGV STEHDEISDI FAAGSSDTLQ YNLAPLLKDG
FFKRDILDPI RQMKPQQDMD FIEVFIQLTR QSRGQFHLKC VPATELGDAQ AKIAFINQSK
LAGRFMALRI YRGATEKPDM GYLRRELEYI NIHANHRAKQ LEEQLWRIIG VGELLDITQE
VELRYPALQK
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