Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1000 |
Symbol | |
ID | 4477528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1169896 |
End bp | 1170390 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725534 |
Product | rare lipoprotein B |
Protein accession | YP_868641 |
Protein GI | 117919449 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00115178 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.163142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATTA AACGCTTAGC TTTCGCAATC ATGGCGCTGG TCATTATGAC CAGCGCAGGT TGCGGTTTTA AGCTTCAACG TAGCTACCAA ATCCCCGAGC AGCTCAATCA ACTCAGTTTG AGCAGCTCGG ACGAATACAG CGAACTCACC CGTTTGGTGC GTGAGCGGTT ACGTTTGAAC AACGTCAAGA TTGTCGATGC TGCCAATGAT GTGCCAGTGT TAAGGCTCAT CACCGACTCC TTAGAGCGTT CTACCCTGTC ACTTTACCCT ACGGGCAATG TGGCTGAGTA TGAGCTTATC TATTTCGTCG AATTTGCCGT GGCCTTGCCG GGCAAAGAGG CGCAGCCTTT CAAGATTGAA ATTCGCCGCG ATTACTTAGA CGACCCTCGC ACCGCACTGG CGAAAAGCCG TGAGATGGAA CTGTTAGTCA AAGAAATGCG TATCCAGGCG GCCGACCGGA TCCTGCAATC CATGGCCAGC ACAGAGGTGA ATTAA
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Protein sequence | MLIKRLAFAI MALVIMTSAG CGFKLQRSYQ IPEQLNQLSL SSSDEYSELT RLVRERLRLN NVKIVDAAND VPVLRLITDS LERSTLSLYP TGNVAEYELI YFVEFAVALP GKEAQPFKIE IRRDYLDDPR TALAKSREME LLVKEMRIQA ADRILQSMAS TEVN
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