| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0952 |
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| Symbol | |
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| ID | 4478878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1115429 |
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| End bp | 1117618 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725485 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_868593 |
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| Protein GI | 117919401 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000770151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTA ATCTACTTCC TCTTGCGGCT GCGGTAACAC TAGCATTGAA TCCTTTGGCG
TTGATGGCCG AAGAACAAAC CTCTTCTAAA ACAGAGACAC AAGATCAAAA TATCGAAAAA
ATCACCGTGA TGGGTAAATA CACTGTGAGT CGAAATATTG ATACAGCGAC AGGTCTCGGA
CTCACATTAC GGGAAACGCC ACAGTCGGTC AGCATCATGA CGGCGGATCG GATTGAAGAT
CAGGCGTTAA ATACTGTGGT CGACGTGGTG AATAACACTG TGGGCCTGTC TTCTTCAAAA
ACCGATAACG TGCGTAACGG TTTTTCGGCC CGCGGTTTTA CCGTACAAAA CTATCAAATT
GATGGCGTGC CTTTATCTTG GAGTTTAGGC GGCGATGCTG GCGAAACGGT ATCGGATGTG
TCTATCTACG AGCGTGTTGA AGTTGTGCGT GGTGCTACCG GTTTATTAAC GGGTGCAGGC
GATCCTTCTG CCTCGATTAA CTTAGTGCGT AAGCATGCCG ACAGCTCAGA TCTTAAAGGT
TATGTGGATG TCGCAACGGG AAGTTGGGAT AAAAAACAAG TCACTGCGGA TGTGTCCAAT
GGTTTGAATG AAGACGGCAG TGTCCGTGGC CGTTTAGTCG CTAAGTATGT GAATAGCGAT
TCTTACCAAA ATCTGTATCA AGACCGTAAA ACCATTCTCT ATGGTGTGGT TGATAGCGAT
ATCACCGCCA ACACTTTACT GCGTGTCGGT GCTAGCTATA ACCACAACGA TCCAAAAGGC
GCGATGTGGG GCGCGTTGCC CGCCGTCTTT AGCGATGGCT CAGCCACAGA TTGGGATACT
TCGGCCACCA CAGCCGCCGA TTGGAGCCGC TGGGAAACCA AGAATATCAA CTACTTTGCT
AACCTAAATC ATTACTTCAG CAATGGTTGG CAACTGGTGG CTAACTACAA CCGCATGGAA
TATGAAACCA CAACTAAGAT GATCTACATG TCGGGTTTAC TCGATAAAGA CACGGGTGCT
GGGCTCAGTG GTCAGCGTTA TCACAGCCAT GGTGAAAGTA ACTCGAATAA CTTTGATGTG
CAGCTTAAGG GCGACTATGA CCTCTTTGGT CAAACCCATG AGTTTGTGAC GGGCGCCTTA
TATAGTAAGC AAAAATCCTA CGCCGATACT TATGAGCCTA TCCGTGACGA TATGACGGGT
TGGGACTCAC AAGTGGTCGA TAACTTCTAC GAATGGCAAC AAAATCAGTT TGCTGAGCCT
GAATGGTCGA CCAATGCGAA CCGTCAGCTC AATATGGATA CCGAGCAAAA AGGCTTTTAT
GCGGCGACTC GCCTGACCAT CACCGATGAT TTCAAACTGA TTGCCGGTGG GCGTATCTCA
AGCTGGAACC GTGAAGGCGT GAGCTATGGT ACCGATACTA ACTTTGGCGA TGATGGTGTG
TTTGTGCCCT ATGTTGGTGC CTTATACGAT ATCAATGAAG AGCACCGTAT TTACGCCAGC
TATACCGGGA TTTTTAATCC GCAGAATAAA CAGGATGCGA GTGGCGATTA TCTTGACCCA
TTAGAGGGGA AAGCATATGA GATTGGTTTA AAAAGTGCGT ATTTAGATGA CCGTCTGCAT
ACATCGCTAG CATTGTTTAA AATCGAGCAG GATAACTTTG GTAAACAAGA TCCGGACTTT
GTACCGACTG AAGAGCAAAT CGCCAACGGC CAAACGACCG CATACTATGC TATCCAAGGT
ACGGAAAGTA AGGGCTTCGA GTTAGAAGTT GTTGGGGAGT TTATCGACGG TTGGAATATT
TCAGCAGGCT ATTCACAATT TAAAGCCGAA GATGCTGAAG GAAATAAGCT GGATACAACC
AGTCCACGTA AGCAATTTAA ACTCTTTACT ACCTATCAAT TTGTGGATTT ATTACCAGAG
TTAACCATTG GTGGTGGAGT GAATTGGCAA AGCGACAGTT ATTCTACAGG TGGCAATGTC
ACTATCACGC AGGATGCCTA TTCTTTGGTG AATCTGATGG CGCGCTACGA TCTGGCTGAA
AATATGGATC TGCAGGTTAA CGTAGAGAAT TTACTGGATG AGAAATATTA CGCCTATATG
TCAACCTCTA GTTATTTGCC AGAAGCTTAT AGCGTATATC ACTACGGTGC GCCACGTAAC
TTTACCGTTA GCTTTAACTA TCGCTTCTAA
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| Protein sequence | MRFNLLPLAA AVTLALNPLA LMAEEQTSSK TETQDQNIEK ITVMGKYTVS RNIDTATGLG
LTLRETPQSV SIMTADRIED QALNTVVDVV NNTVGLSSSK TDNVRNGFSA RGFTVQNYQI
DGVPLSWSLG GDAGETVSDV SIYERVEVVR GATGLLTGAG DPSASINLVR KHADSSDLKG
YVDVATGSWD KKQVTADVSN GLNEDGSVRG RLVAKYVNSD SYQNLYQDRK TILYGVVDSD
ITANTLLRVG ASYNHNDPKG AMWGALPAVF SDGSATDWDT SATTAADWSR WETKNINYFA
NLNHYFSNGW QLVANYNRME YETTTKMIYM SGLLDKDTGA GLSGQRYHSH GESNSNNFDV
QLKGDYDLFG QTHEFVTGAL YSKQKSYADT YEPIRDDMTG WDSQVVDNFY EWQQNQFAEP
EWSTNANRQL NMDTEQKGFY AATRLTITDD FKLIAGGRIS SWNREGVSYG TDTNFGDDGV
FVPYVGALYD INEEHRIYAS YTGIFNPQNK QDASGDYLDP LEGKAYEIGL KSAYLDDRLH
TSLALFKIEQ DNFGKQDPDF VPTEEQIANG QTTAYYAIQG TESKGFELEV VGEFIDGWNI
SAGYSQFKAE DAEGNKLDTT SPRKQFKLFT TYQFVDLLPE LTIGGGVNWQ SDSYSTGGNV
TITQDAYSLV NLMARYDLAE NMDLQVNVEN LLDEKYYAYM STSSYLPEAY SVYHYGAPRN
FTVSFNYRF
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