Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0941 |
Symbol | |
ID | 4478867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1102449 |
End bp | 1103081 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725474 |
Product | Na(+)-translocating NADH-quinone reductase subunit D |
Protein accession | YP_868582 |
Protein GI | 117919390 |
COG category | [C] Energy production and conversion |
COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.116273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG CTAAAGAGCT GAAACAGGTT CTGACTGGAC CTATCGTCAA CAACAACCCG ATTGCATTAC AAGTCCTTGG TGTATGTAGT GCGTTAGCGG TAACGAGCAA ACTCGAAACT GCACTGGTAA TGGCGTTGGC ATTAACTGCG GTAACAGCGT TTTCTAACCT GTTTATCTCA ATGATCCGTA ACCATATTCC TAGCAGCGTA CGTATTATCG TACAGATGAC CATTATTGCC TCTTTGGTAA TCGTGGTTGA CCAATTGCTG CAGGCTTATG CTTATCAGAT TTCTAAGCAG TTATCGGTAT TCGTGGGCCT GATCATTACG AACTGTATCG TAATGGGTCG CGCTGAAGCC TATGCGATGA AAACACCGCC AATGATGAGC TTTATGGATG GTATCGGTAA CGGTTTAGGT TACGGTGCGA TTCTGTTAGC CGTTGGCTTC GTGCGTGAAC TGTTTGGTAA CGGTTCTCTG TTCGGTGTTC AAATCCTGCA CAAGATCTCT GAAGGTGGCT GGTATCAACC AAACGGTCTG TTATTACTGC CGCCAAGTGC GTTCTTCCTG ATCGGTATTC TGATTTGGAT TATTCGTACC TATAAGCCAG AGCAAGTTGA AGCAAAAGGG TAA
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Protein sequence | MSDAKELKQV LTGPIVNNNP IALQVLGVCS ALAVTSKLET ALVMALALTA VTAFSNLFIS MIRNHIPSSV RIIVQMTIIA SLVIVVDQLL QAYAYQISKQ LSVFVGLIIT NCIVMGRAEA YAMKTPPMMS FMDGIGNGLG YGAILLAVGF VRELFGNGSL FGVQILHKIS EGGWYQPNGL LLLPPSAFFL IGILIWIIRT YKPEQVEAKG
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