Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0918 |
Symbol | |
ID | 4477463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1073023 |
End bp | 1074360 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725451 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_868559 |
Protein GI | 117919367 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00150537 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGTCAAT CAGCCCAAAC CACTGCACCG AGTAGCCCGG CATCCTTTAT TGCCCTGTTA CCCTTATTCG TTTTTTTAAG TCTGTTTATT GGCGCAGGCG TCTATTTCCA AAGCCAAGGT GTAGACTTTG CCTTCTATCA ATTACCGAGT GTGATTGCCA TTCTGCCAGC CATAATTCTG GCCTTGGTAT TATCAAAACA AAAACTCAAT CAAGCGATTG ATACCTTTAT CGGCGGTATT GGCCACAGCA ATATTATTGC TATGTGTTTG ATTTACTTGC TGGCTGGCGG TTTTGCTGCG GTAGCGAAAG CCACTGGTGG TGTCGATGCG ACCGTTGCCT TAGGTTTATC CCTTATTCCT TCAAACCTAT TACTGCCCGG CTTTTTTGTG ATTGCCGCCT TTATTGCCAC CGCAATGGGT ACCTCAATGG GCACAATCGC CGCCGTGGCA CCTATCGCCT TAGGCGTTGC CGATCAGGCA CAAATTGATT ATGCCCTGAT GGCGGGCGCC GTGATGTCTG GCGCACTGTT TGGCGATAAC CTTTCGATTA TTTCGGATAC CACTATTGCG GCCACTCGTA CTCAAGGCTG TGATATGAAA GATAAATTCC GCGAGAACCT GATTTTTGCG ATCCCTGCTT CACTGCTAAC TTTTGTCGCC TTTGTGATTG CAGGCCAAGG CCAAGCCGAT CTAGCCGCTC AGGATATCGA CTTTATCAAG GTGATTCCTT ACCTGACGAT TCTGGTATTA GCAGTCGCAG GGTTAAACGT GTTCGTCGTC TTGACCTTAG GCATTCTGCT GGCGGGCGCT GCGGGATTCC TGACCATGGA CTATGGCGTT ATCCAATTTG GTAAGGATAT CTACGCGGGC TTTAGCAATA TGCAGGAAAT CTTCATCCTG TCGATGTTAG TCGGTGGTTT AGCAGCGCTG ATGCAGCAAC AAGGTGGTTT AGCCTTTGTG AGCAAACAGA TTGAAAAGCT CATCACCCGT TTCTCAAAAG CTCAAGGTGA AGCCTCATGC CGCGCGGCCG AATTAGGCAT GGCAGGGATT GTGGCCGTCA CCAACAGCTG CGTTGCCAAC AACACAGTGT CTATCGTAGT GACGGGTGAT ATTGCTAAAG ATCTGGCAGA AAAACACGGT GTTAGCCCTA AGCGTGCGGC CAGTGTACTC GATATTTTTG CCTGTATTAT CCAAGGATTA ATTCCCTATG GCGCCCAAGC ACTGCTAATC GCTTCAACCT TTAGCATCAC ACCGCTGGCG GCTGTATCCC ACGCTTGGTA CTGCATGATC CTAGCGGCTG TCGCGATTGC GATTGTGATT TTCCGTAAGC GCCACTAA
|
Protein sequence | MSQSAQTTAP SSPASFIALL PLFVFLSLFI GAGVYFQSQG VDFAFYQLPS VIAILPAIIL ALVLSKQKLN QAIDTFIGGI GHSNIIAMCL IYLLAGGFAA VAKATGGVDA TVALGLSLIP SNLLLPGFFV IAAFIATAMG TSMGTIAAVA PIALGVADQA QIDYALMAGA VMSGALFGDN LSIISDTTIA ATRTQGCDMK DKFRENLIFA IPASLLTFVA FVIAGQGQAD LAAQDIDFIK VIPYLTILVL AVAGLNVFVV LTLGILLAGA AGFLTMDYGV IQFGKDIYAG FSNMQEIFIL SMLVGGLAAL MQQQGGLAFV SKQIEKLITR FSKAQGEASC RAAELGMAGI VAVTNSCVAN NTVSIVVTGD IAKDLAEKHG VSPKRAASVL DIFACIIQGL IPYGAQALLI ASTFSITPLA AVSHAWYCMI LAAVAIAIVI FRKRH
|
| |