Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0879 |
Symbol | |
ID | 4477090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1025709 |
End bp | 1026392 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725415 |
Product | hypothetical protein |
Protein accession | YP_868523 |
Protein GI | 117919331 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0937382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.312056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAC TTAAATTCGG TAAGATCAAA AATTACAAAG ACGATCGTGG CTTCGGTTTC ATCTTCTCGG AATGTAAATT CATTCACCAT GCAATCATAG GTTCTAAAGA AGTGTTCTTT CACATCAAAC AGGCTAAGAA GTTTGAATCC ACACTGAAAT CAGCTACACC TCAAGAAGAC CTATGCTTCT GGCTCACTAC AGAAACTACT CGTAAAGGCG AGGCCGTTAA GCAGATGTGG ATCAAGCTAT CCGACATCCC TCAAGATATT CGTGAAGGTA ACGCCGAGTT CATTAAACAA GTAGCGGAGA ATATTAAGAT CTATGAAGCA GCTAAAGCAG AGAAACGTGC TCGTGAAGCT GAGGAGCGCA TTCAGCAAGA GGCTCTTCGT AAAGCACGTG AAGTTCGTGA TTCTGAACTC AATGCCCTGA TTGTAGCTGC ACGTAGCCAA GGGTTCTCAA CTAGTGGACA ATTGTCAGCA TGGATTCGGG CTAATAAGCT GTGGACTAAA TATCCGACAC TAACAGGCGA CTTGACTATG CACGATGGCG AGATGTCATG GAACTTTGGG GCAGCTATTG ACCCTCAGTA CTACAAGCAG GTTTGCCAAG CTTTAGGTCT ACATAACGCG GGTTCTAACG CAAGAGCTGG AGCTTTCCGT TCGTATGCAA GTATGGAGCG TTAA
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Protein sequence | MQQLKFGKIK NYKDDRGFGF IFSECKFIHH AIIGSKEVFF HIKQAKKFES TLKSATPQED LCFWLTTETT RKGEAVKQMW IKLSDIPQDI REGNAEFIKQ VAENIKIYEA AKAEKRAREA EERIQQEALR KAREVRDSEL NALIVAARSQ GFSTSGQLSA WIRANKLWTK YPTLTGDLTM HDGEMSWNFG AAIDPQYYKQ VCQALGLHNA GSNARAGAFR SYASMER
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