Gene Shewana3_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0879 
Symbol 
ID4477090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1025709 
End bp1026392 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID639725415 
Producthypothetical protein 
Protein accessionYP_868523 
Protein GI117919331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0937382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.312056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TTAAATTCGG TAAGATCAAA AATTACAAAG ACGATCGTGG CTTCGGTTTC 
ATCTTCTCGG AATGTAAATT CATTCACCAT GCAATCATAG GTTCTAAAGA AGTGTTCTTT
CACATCAAAC AGGCTAAGAA GTTTGAATCC ACACTGAAAT CAGCTACACC TCAAGAAGAC
CTATGCTTCT GGCTCACTAC AGAAACTACT CGTAAAGGCG AGGCCGTTAA GCAGATGTGG
ATCAAGCTAT CCGACATCCC TCAAGATATT CGTGAAGGTA ACGCCGAGTT CATTAAACAA
GTAGCGGAGA ATATTAAGAT CTATGAAGCA GCTAAAGCAG AGAAACGTGC TCGTGAAGCT
GAGGAGCGCA TTCAGCAAGA GGCTCTTCGT AAAGCACGTG AAGTTCGTGA TTCTGAACTC
AATGCCCTGA TTGTAGCTGC ACGTAGCCAA GGGTTCTCAA CTAGTGGACA ATTGTCAGCA
TGGATTCGGG CTAATAAGCT GTGGACTAAA TATCCGACAC TAACAGGCGA CTTGACTATG
CACGATGGCG AGATGTCATG GAACTTTGGG GCAGCTATTG ACCCTCAGTA CTACAAGCAG
GTTTGCCAAG CTTTAGGTCT ACATAACGCG GGTTCTAACG CAAGAGCTGG AGCTTTCCGT
TCGTATGCAA GTATGGAGCG TTAA
 
Protein sequence
MQQLKFGKIK NYKDDRGFGF IFSECKFIHH AIIGSKEVFF HIKQAKKFES TLKSATPQED 
LCFWLTTETT RKGEAVKQMW IKLSDIPQDI REGNAEFIKQ VAENIKIYEA AKAEKRAREA
EERIQQEALR KAREVRDSEL NALIVAARSQ GFSTSGQLSA WIRANKLWTK YPTLTGDLTM
HDGEMSWNFG AAIDPQYYKQ VCQALGLHNA GSNARAGAFR SYASMER