Gene Shewana3_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0798 
Symbol 
ID4477009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp921368 
End bp921862 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID639725334 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_868442 
Protein GI117919250 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.477515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTC ATTATGTTAT AGAGAGTTTA TTTATGGAAA CCGCATTTCA GCGCGATCAG 
CTTGATAACC ATATCCTCGA AGCCTTAATG CAAGACGCGC GCACACCTTT TGCCGAACTT
GCCAAACGTT TCGGCGTGAG TGCGGGTACC ATTCATGTGC GTGTCGAGAA AATGAAACAA
GCGGGGATTA TCACGGGTGC CCAGATCACC ATCAATCCCA AGGCACTGGG TTACGATGTC
TGCTGTTTTA TTGGAATTAA TCTCAAAAGT GCTGGCGACT ACCCCGCCGC CATCGCCAAG
CTAAACGCCC TAGAAGAAGT GGTTGAAGCC TACTATACCA CTGGCAACTA CAGCATTTTT
GTCAAAGTCA TGTGCCAATC CATCGATGGC CTGCAACATG TGCTGATTAA CCGCATCCAA
TCAATCGACG AAATTCAATC GACTGAAACC CTGATCAGCC TGCAAAACCC GATTACACGG
GCAGTAAAGC CTTAA
 
Protein sequence
MTIHYVIESL FMETAFQRDQ LDNHILEALM QDARTPFAEL AKRFGVSAGT IHVRVEKMKQ 
AGIITGAQIT INPKALGYDV CCFIGINLKS AGDYPAAIAK LNALEEVVEA YYTTGNYSIF
VKVMCQSIDG LQHVLINRIQ SIDEIQSTET LISLQNPITR AVKP