Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0774 |
Symbol | |
ID | 4476985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 895576 |
End bp | 896823 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725310 |
Product | hypothetical protein |
Protein accession | YP_868418 |
Protein GI | 117919226 |
COG category | [S] Function unknown |
COG ID | [COG5505] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAGCA CGGCATTAGT CACCAATGAC GCGGTGGCGC TGGGAATATT GGCAACGATT CTGGGATTTG TGTTTTATAC CAGCAGTAGT AGTCATCCAT TTTGGCAAAA GTTTTACCGT TTTATCCCAG CGTTATTACT CTGCTATTTC TTGCCATCGT TGTTGAATAC CTTTGGTGTG ATCGATGGTG GGACATCACA GCTTTACTAT GTTGCCTCGC GCTACCTATT GCCCGCCTGT TTGGTGTTAT TGATTTTAAG TGTGGATTTA AAAGCCATCT TAGGACTTGG GCCTAAGGCA GTGATCATGT TTTTAACTGG GACAGTCGGC ATTGTGATTG GCGGGCCGAT TGCACTGCTC GTGGTGTCCT TTATCGAGCC ATCGTTGATT GGTGTCGATA GTCCTGATGC GGTGTGGCGT GGCATGACGA CCCTTGCGGG CAGTTGGATT GGCGGCGGTG CGAACCAAGC CGCGATGAAA GAAATTTATG AAGTGGGCGG CAATATCTTC TCCGTGATGG TGACAGTCGA TGTGATTGTG GCCAATATTT GGATGGCGGT ATTGTTGTTT ATGGCGTCAA AAGCCAAGGA AATCGATGCC AAAACAGGTG CGGATACCTC AGCAATTGAG ACTTTAAAGA ACAAGGTTGA ACAGTATCAC GCTGAAAATG CGCGTATTCC AAGCCTGCGT GATCTAATGC TGATTGTGGC TGTCGGATTT GGCATCACGG GCGTGGCCCA TATTGCCGCC GATTTCCTCG GTCCTTATTT TGAGGCCAAC TATCCTTGGA CTGAGGATTA CAGTTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATTGTG ACCACCATAG GTTTAGCTAT GTCCTTTAGC CCTATGCGCC ATTTAGAGGC GGCGGGGGCT TCTAAGGTGG CGTCGGCGTT CTTGTATATT TTGGTGGCGA CCATTGGTTT ACATATGGAT GTAAGCAAGG TGCTTGATAC ACCGCTATAT TTTTTAGTGG GCATTATTTG GATGATAGTG CACGCTGGCT TTATGTTATT GATTGCTAAG TTAATTAAGG CTCCATTGTT TTATATGGCC GTGGGCAGTC AGGCAAACGT GGGGGGAGCT GCATCGGCGC CCGTTGTGGC AGCGGCGTTC CACCCAGCTT TAGCCCCTGT AGGGGTATTG TTAGCCGTAT TTGGTTATGC GCTAGGCACT TATATGGCGT GGCTCTGCGG TCAGTTACTG CAAGCCGTCG CGGTATAG
|
Protein sequence | MASTALVTND AVALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV IDGGTSQLYY VASRYLLPAC LVLLILSVDL KAILGLGPKA VIMFLTGTVG IVIGGPIALL VVSFIEPSLI GVDSPDAVWR GMTTLAGSWI GGGANQAAMK EIYEVGGNIF SVMVTVDVIV ANIWMAVLLF MASKAKEIDA KTGADTSAIE TLKNKVEQYH AENARIPSLR DLMLIVAVGF GITGVAHIAA DFLGPYFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PMRHLEAAGA SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMIV HAGFMLLIAK LIKAPLFYMA VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAV
|
| |