Gene Shewana3_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0774 
Symbol 
ID4476985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp895576 
End bp896823 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content49% 
IMG OID639725310 
Producthypothetical protein 
Protein accessionYP_868418 
Protein GI117919226 
COG category[S] Function unknown 
COG ID[COG5505] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA CGGCATTAGT CACCAATGAC GCGGTGGCGC TGGGAATATT GGCAACGATT 
CTGGGATTTG TGTTTTATAC CAGCAGTAGT AGTCATCCAT TTTGGCAAAA GTTTTACCGT
TTTATCCCAG CGTTATTACT CTGCTATTTC TTGCCATCGT TGTTGAATAC CTTTGGTGTG
ATCGATGGTG GGACATCACA GCTTTACTAT GTTGCCTCGC GCTACCTATT GCCCGCCTGT
TTGGTGTTAT TGATTTTAAG TGTGGATTTA AAAGCCATCT TAGGACTTGG GCCTAAGGCA
GTGATCATGT TTTTAACTGG GACAGTCGGC ATTGTGATTG GCGGGCCGAT TGCACTGCTC
GTGGTGTCCT TTATCGAGCC ATCGTTGATT GGTGTCGATA GTCCTGATGC GGTGTGGCGT
GGCATGACGA CCCTTGCGGG CAGTTGGATT GGCGGCGGTG CGAACCAAGC CGCGATGAAA
GAAATTTATG AAGTGGGCGG CAATATCTTC TCCGTGATGG TGACAGTCGA TGTGATTGTG
GCCAATATTT GGATGGCGGT ATTGTTGTTT ATGGCGTCAA AAGCCAAGGA AATCGATGCC
AAAACAGGTG CGGATACCTC AGCAATTGAG ACTTTAAAGA ACAAGGTTGA ACAGTATCAC
GCTGAAAATG CGCGTATTCC AAGCCTGCGT GATCTAATGC TGATTGTGGC TGTCGGATTT
GGCATCACGG GCGTGGCCCA TATTGCCGCC GATTTCCTCG GTCCTTATTT TGAGGCCAAC
TATCCTTGGA CTGAGGATTA CAGTTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATTGTG
ACCACCATAG GTTTAGCTAT GTCCTTTAGC CCTATGCGCC ATTTAGAGGC GGCGGGGGCT
TCTAAGGTGG CGTCGGCGTT CTTGTATATT TTGGTGGCGA CCATTGGTTT ACATATGGAT
GTAAGCAAGG TGCTTGATAC ACCGCTATAT TTTTTAGTGG GCATTATTTG GATGATAGTG
CACGCTGGCT TTATGTTATT GATTGCTAAG TTAATTAAGG CTCCATTGTT TTATATGGCC
GTGGGCAGTC AGGCAAACGT GGGGGGAGCT GCATCGGCGC CCGTTGTGGC AGCGGCGTTC
CACCCAGCTT TAGCCCCTGT AGGGGTATTG TTAGCCGTAT TTGGTTATGC GCTAGGCACT
TATATGGCGT GGCTCTGCGG TCAGTTACTG CAAGCCGTCG CGGTATAG
 
Protein sequence
MASTALVTND AVALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV 
IDGGTSQLYY VASRYLLPAC LVLLILSVDL KAILGLGPKA VIMFLTGTVG IVIGGPIALL
VVSFIEPSLI GVDSPDAVWR GMTTLAGSWI GGGANQAAMK EIYEVGGNIF SVMVTVDVIV
ANIWMAVLLF MASKAKEIDA KTGADTSAIE TLKNKVEQYH AENARIPSLR DLMLIVAVGF
GITGVAHIAA DFLGPYFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PMRHLEAAGA
SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMIV HAGFMLLIAK LIKAPLFYMA
VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAV