| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0760 |
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| Symbol | |
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| ID | 4476971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 882233 |
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| End bp | 882940 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725296 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_868404 |
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| Protein GI | 117919212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000225375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.539293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGTTGA GTCGTCCCGT GCGTTTAGAC AAATTTATCT GTGAAAGTAC CTCGCTTACC
CGTTCTTTAG CGAAAAAAGC CCTGCACCGT GGTGACATCA CCTGTGATGG GGCTGTGATT
AAAGATGCTG GTTTTAAAGT GCTCGAGGGG ATGCAAGTAT GTCTCGAAGG TGAGTTTATC
TCCCTCGTTG GTGAGCGCTA CCTGATGCTA AATAAGCCTG TGGATACGAT TTGCTCGACC
ATAGATGAAG TCTACCCTTC GGTATTGAGC TTGCTGGATA TTGAAAAGCC CGAAACCTTA
CACATTGCCG GCCGTTTAGA TGCCGATACT ACTGGCCTTG TGCTGATCAC GAGCGATGGT
CAATGGTCGC ATCGGATCAC CTCGCCTAAA AAAGACTGTG GCAAGCGTTA CTTAGTGACC
TTAGCCGAGC CTGTGGATGA GAGTCTGATT GGTGTCTTTG CTGCTGGAGT GGAGCTGAGA
AACGAAGACT GCCTGACAAA ACCCGCCTTG CTTGAAATCA TCGAGCCGCA GCTGGTGCGT
TTAACCATTA CCGAAGGTAA GTATCACCAA GTGAAGCGGA TGTTTGCCGC CGTAGGTAAT
CATGTGGTTG GCTTACACCG TGAAAGCATT GGCAAAATTG AATTAGACGC AGAACTTGCC
CTAGGTGAAT GGCGTTATCT GACGAGCGAA GAAATCGCCT CGATTTAA
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| Protein sequence | MKLSRPVRLD KFICESTSLT RSLAKKALHR GDITCDGAVI KDAGFKVLEG MQVCLEGEFI
SLVGERYLML NKPVDTICST IDEVYPSVLS LLDIEKPETL HIAGRLDADT TGLVLITSDG
QWSHRITSPK KDCGKRYLVT LAEPVDESLI GVFAAGVELR NEDCLTKPAL LEIIEPQLVR
LTITEGKYHQ VKRMFAAVGN HVVGLHRESI GKIELDAELA LGEWRYLTSE EIASI
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