| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0718 |
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| Symbol | |
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| ID | 4476928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 836488 |
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| End bp | 837492 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725253 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_868362 |
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| Protein GI | 117919170 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00191335 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000636763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGAAAA ATAATCTTAA TGATGGTCTA CAGCTCGACC GCACCTTTTC CATTGCGCCC
ATGCTCGACT GGACGGATCG TCATTACCGT TATTTTGCTC GCTTAATGTC GGCCAATGCC
TTGCTGTATA CCGAGATGGT GACGACGGGG GCGATTTTGC ATGGCCGTGG TGATTATCTT
GCCTATAACC AAGAAGAACA TCCCCTTGCA TTGCAATTGG GGGGCTCGAA TCCTGCTGAG
CTTGCTCGCT GCGCCAAACT TGCCGCCGAG CGCGGTTATG ATGAAGTGAA CCTCAATGTG
GGCTGTCCTT CCGATCGGGT GCAAAACGGT CGCTTTGGTG CCTGTTTGAT GGCGGAACCT
GAGCTGGTGG CTGAATGTGT CGATGCCATG AAGCAAGCGG TTGATATACC AGTGACGGTA
AAAACACGTA TCGGCATTGA CGAGCAGGAT AGCTATGAGT TTTTGACTCA CTTTATTGAT
ACTGTTATGG CTAAAGGCTG TGGTGAATTT ATTATCCATG CGCGTAAGGC GTGGTTACAG
GGCTTAAGTC CGAAGGAAAA TCGCGAGATC CCGCCCTTAG ACTACGACAG GGTGTATCAG
CTTAAGCGTG ATTATCCGAC GCTCAATATC AGCATTAACG GTGGTATCAC TAGCCTTGAA
CAGGCTAAAA CTCACTTGCA ACACTTAGAT GGTGTGATGG TGGGACGTGA GGCTTACCAA
AATCCCTATA TTCTGGCGCA GGTTGACCAA CTGCTCTGTG GCAGTCAGAA GGCGGTGATG
AGCCGTGAAG CTGTGATTGA GACCATGTTG CCCTATATCG AGGCTCACTT GCAGGCGGGC
GGGCGCTTAA ATCATATCAC TCGTCATATG ATTGGCTTAT TCCAAGGCTT ACCGGGTGCC
CGTGCGTGGC GTCGTTATTT GAGCGAAAAC GCCCATAAAA ATGGTGCAGG TATTGAGGTG
GTCAAGCAGG CTTACCAAAG TATTCAGAGT GAAATAACTG CTTAA
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| Protein sequence | MLKNNLNDGL QLDRTFSIAP MLDWTDRHYR YFARLMSANA LLYTEMVTTG AILHGRGDYL
AYNQEEHPLA LQLGGSNPAE LARCAKLAAE RGYDEVNLNV GCPSDRVQNG RFGACLMAEP
ELVAECVDAM KQAVDIPVTV KTRIGIDEQD SYEFLTHFID TVMAKGCGEF IIHARKAWLQ
GLSPKENREI PPLDYDRVYQ LKRDYPTLNI SINGGITSLE QAKTHLQHLD GVMVGREAYQ
NPYILAQVDQ LLCGSQKAVM SREAVIETML PYIEAHLQAG GRLNHITRHM IGLFQGLPGA
RAWRRYLSEN AHKNGAGIEV VKQAYQSIQS EITA
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