| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0619 |
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| Symbol | |
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| ID | 4476829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 724189 |
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| End bp | 724761 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725155 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_868264 |
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| Protein GI | 117919072 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000149987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.458394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTACAAC GACTCTTCCT TGGGTTTGCC CCCACAAGCA TACAGCGGCA ACAACTGCTG
CAATTGCAGC AAAGCTTGGC GCCACATTTA GCGCCACATG CTAAACCCGT CATCCAAAGC
AATTTACACT TAACCCTCGC GTTTTTAGGA CTCGCCAATC CGACTCAAGT GGCGCAGTTA
CTCGACGGTG TCGATAAGCT GGCTAAACCG AAATTCAGTG TCACGCTGGA TAACATCGCC
GTGTGGCCTA AGGCGCAGAT CTGTTGTTTA AAGGGCGATA GCATTAGTCC TGAGTTAGCC
CTCTTAGCAT CTCAGGCACA GGATTTAGCC CAACAGTTAC AATTGCACCT GAGTGAGCAT
CCGTTTCGGC CCCATATCAG CTTGTTTAGA AAGGCAAAGC CGTCAGGCAT CTTGGCGAGT
GAGCGAACGC TTAAGGAGTT GGTCCAGCAG AACGTCATCC AAGCTTCGAT GCTTGAACTC
ACGCTCGCAC CCGAGGAGCT GCACTTATAT CTTTCCGCCA GTGGCAGACG CTGTGTGGAA
TATCAAATCT TACATTCTTG GCCGCTCGCA TAA
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| Protein sequence | MLQRLFLGFA PTSIQRQQLL QLQQSLAPHL APHAKPVIQS NLHLTLAFLG LANPTQVAQL
LDGVDKLAKP KFSVTLDNIA VWPKAQICCL KGDSISPELA LLASQAQDLA QQLQLHLSEH
PFRPHISLFR KAKPSGILAS ERTLKELVQQ NVIQASMLEL TLAPEELHLY LSASGRRCVE
YQILHSWPLA
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