Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0521 |
Symbol | |
ID | 4479712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 611838 |
End bp | 612791 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725054 |
Product | LysR family transcriptional regulator |
Protein accession | YP_868167 |
Protein GI | 117918975 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA ATCGTGTGCA GATATTTGCC CAAGTGGTCG AGCAAGGCAG CTTCACTGGC GCCGCTAAGG CCCTTGGTTT AACTAAGGCC ACTGTCAGCC GCAAGATTGC CGAACTGGAG TCAGATACTG GTACCCAGTT GTTATTCCGA ACGACCCGCG CCCTCAAACT CACCGAGGCA GGATCGAGTT ACTACAATCG GATCAATAAG ATCTTGAGCG ATCTGCAGAG CGCCGAAAAT CAACTCAGCG CCCATCAGCA ATTGATTAAA GGCAACCTAA AAATAGTGTG CCCCATCGAA TTAGGCCAAT TGTTCCTCGG GCCTATCTTC GCCCAGTTTT TAACCCTTTA TCCCGATATC ACCATTGAGG CTGAGCTCAC TAACCGTAAG GTGGATGTGA TAGAAGAAGG TATCGATTTG TTATTCCAAA TCGCCGACTC GAGCGATACT CGTTTGCAGA GTTATTCCTT AGTTAACGCC TACAAATCCT TGATGGCCAG CCCAAGTTAT TTAGCCGAAC ACGGCACGCC AAAAGTGCCG CAGGACTTAG CCAAGCATAA AGCGATTCGC TTACAGTCGG CCCATATTGA AGGTGCGTGG AAGCTGTTTG ATGGCCAGTC TTGGGTGGTG ATTGAACCCG TCACCCAACT GACGGTAAAC AATGTCACTA TTGCCCGCGA AGCCGCCATT GCGGGGCTTG GCATTACGGC CGTGCCGTCG ATTATTGCGC AAGAGGCGAT AGAGAAAGGT TATTTAGTGC CACTCCTCGA CGATTATCCT ATGGTACAAA CTAAAGTGGT GCTCAGCTAT CCCAAACGAG CGTATTTGCC CCGCAAATAC CGTGTCTTTA TCGAGTTTAT TTATACCGCC CTGTTCAAAC GCTGGGGATC ACAGGTACTA GAAGTGCCGG AATTTATTGG CCAGCAAGAA CCCAATAACT CTCGTTCGAC TTAA
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Protein sequence | MDLNRVQIFA QVVEQGSFTG AAKALGLTKA TVSRKIAELE SDTGTQLLFR TTRALKLTEA GSSYYNRINK ILSDLQSAEN QLSAHQQLIK GNLKIVCPIE LGQLFLGPIF AQFLTLYPDI TIEAELTNRK VDVIEEGIDL LFQIADSSDT RLQSYSLVNA YKSLMASPSY LAEHGTPKVP QDLAKHKAIR LQSAHIEGAW KLFDGQSWVV IEPVTQLTVN NVTIAREAAI AGLGITAVPS IIAQEAIEKG YLVPLLDDYP MVQTKVVLSY PKRAYLPRKY RVFIEFIYTA LFKRWGSQVL EVPEFIGQQE PNNSRST
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