| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0517 |
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| Symbol | |
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| ID | 4479708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 606137 |
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| End bp | 607417 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639725050 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_868163 |
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| Protein GI | 117918971 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAT TTACTCAAAA ATCGTCTTTC CAAACGTTGG GCACAGTGTC TACTGCGGGC
TTAAGGTCGT TGTTTACTCC TTCCCGTTTA GTATTGGCCT TGATGCTGAC CTCCTTAACC
CTAACGCCGA GCTTCGCGGG TGAAGGCCAT GATCACGACG CTGAAAAGGT CACCAATAAG
GCAGAAAAAA GCGCTTCAGC GACTGAAGAT GACCATGGTG AGCAGGCACT CACTTTTACG
CCTGCGCAGT TGGAACTCGC TGGCGTGCGC CTGTTGCCCT TGAGCAGCGA TAGCTTAAGT
TTTAGCAATC TCAACCTCGA TACTATGGCG ACCGCCACTC TAGTCGTTGA CCGTGATAGA
ACCGCGACCT TAGCGCCGCA GCTGGATGTG CGGGTGCAGG CGCGCCATGT GGTGCCCGGC
CAAGAGGTGA AAAAAGGTGA GCCCTTACTG ACCTTAGGCG GTGCAGAAGT CGCCAAGGCG
CAGGCGGAAT ATATCAATGC CGCTGCCGAG TGGAGTCGAG TGCGTCGTAT GAGTGAGGGC
GCAGTGAGTG TCAGCCGCAG AATGCAGGCG CAGGTCGATG CCGAACTGAA GCGAGCAATT
CTGGAGGCGA TCAAGATGAC GGATGCACAA ATTCGTACCT TAGAGTCGAC CCCAGAAGCT
ATCGGCAGCT ATCAACTTTT AGCGCCTATC GATGGCCGTG TGCAGCAGGA TATCGCCATG
CTAGGCCAAG TGTTCACCGC TGGCACACCA TTAATGCAGT TGACCGATGA GTCGCACCTT
TGGGTGGAAG CACAATTAAC CCCGGCGCAG GCGGCCAATG TGAATGTCGG TGGCCCGGCG
TTGGTGCAAG TGGGTGATAA AACGCTGGCG GGCAAGATTA TTGGCCGTTC CCATGAGCTG
GATAGCGTGA CCCGCACCGA GCAGATTTTA GTCAGCATGC CAAACCCAGA GCATGTGCTG
CACGCCGGGC AATTTGCCGA GCTGTATTTT GCCGATGCGC CTAAGGGCAG CGACTTATCA
TCAGGCTTCT CTTCTGGAAT CGTCTTACCC GATGCGGCGC TAACCCGCAG TGGTGACGGC
GATTGGCAGA TCTTTATTCA AGACGAAGAT GGTTTTGAAG CCATTGAGGT GGAGCTAGTG
CAGCGTCAGC GCGGCTTAAG TTTAGTGCGC GGCGACAAGT TAGATAAGGC ACGACAGGCA
CAACTAAAAG TGGTGGTGGG AGGCGCATTT TTCTTGGCGT CGGAGCAGGC TAAAGCTGGC
TTTGATATTC ATGCCCACTA A
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| Protein sequence | MNSFTQKSSF QTLGTVSTAG LRSLFTPSRL VLALMLTSLT LTPSFAGEGH DHDAEKVTNK
AEKSASATED DHGEQALTFT PAQLELAGVR LLPLSSDSLS FSNLNLDTMA TATLVVDRDR
TATLAPQLDV RVQARHVVPG QEVKKGEPLL TLGGAEVAKA QAEYINAAAE WSRVRRMSEG
AVSVSRRMQA QVDAELKRAI LEAIKMTDAQ IRTLESTPEA IGSYQLLAPI DGRVQQDIAM
LGQVFTAGTP LMQLTDESHL WVEAQLTPAQ AANVNVGGPA LVQVGDKTLA GKIIGRSHEL
DSVTRTEQIL VSMPNPEHVL HAGQFAELYF ADAPKGSDLS SGFSSGIVLP DAALTRSGDG
DWQIFIQDED GFEAIEVELV QRQRGLSLVR GDKLDKARQA QLKVVVGGAF FLASEQAKAG
FDIHAH
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