| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0516 |
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| Symbol | |
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| ID | 4479707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 604751 |
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| End bp | 606121 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725049 |
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| Product | outer membrane efflux family protein, putative |
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| Protein accession | YP_868162 |
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| Protein GI | 117918970 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CCATTATCGC CCAGACCTTG TTTGGCCTGT TTAGCACACT CATGCTCGTT
GGCGGACAGG TTCACTCTGC TGTTGCAGCA ACCTCAGGCC TTGAAGTGAA CGAGCTAAAT
GCCGAAGGCA CTTTATTAGC GCAAGGCGAG CTATTAACCG AAGAAACTCA AGCTTCCCTC
AAGCAGTGGA TGCCAGAGTT ACTCAAGCAA ATTAATCAGT TACCCGAAGT GCAGGCACAA
ATTGCTCGGC AGCAACAGGC AGAGCTCGCC ATTGCGGCAG CGGATCGCGC CATCTATAAC
CCTGAGCTTG GACTCAATTA TCAAAACGCC GACACCGATA CCTACAGCCT AGGGCTGAGT
CAAACCCTAG ATTGGGGTGA TAAGCGCGGC GTCGCGACTC GCCTTGCCCA GCTCGAGGCA
CAAATCCTGT TAGCGGATAT ACAGCTAGAG CGCAGTCAGA TGTTGGCCGA GCGGCTATTG
GCACTGGCCG AGCAGGCGCA AAGCAATAAG GCGCTGACCT TTGCCGAGCA GCAATTAAGG
TTTACGCAGG CACAGCTCAA TATTGCCGAG CAGCGCTTTG CGGCGGGGGA TTTATCCGAT
GTTGAGTTGC AACTGCTAAA GCTCGAACTG GCGAGTAACA CCGCCGATTA TGCGCTGGCC
GAGCAAGCGG CGTTAGTGGC CGATGGCAAA GTCATCGAAT TACTCGGCGT CGATAAGCTG
GGATTTAGGG AGTTTATCCC CGAGATTGGT CAATGGGTGA CGCAATTGAC CCCGAAAGTG
GATTTACCCG CATTGACCAG TGCCCATCAA CAGGTGCAGC TGGCCAAGGC CAATGCCATG
AAGGTTAAGG CGGACACTGC GGCCGATCCC ACCATTAACC TAGGTGTTGA AAAGGAAGGC
GATGACAACA AGTTTGGCGT CGGCGTGGCC ATCCCTTTGC AGGTGCGGAA TAACTACAGT
GAGTTACAGG CGGTTGCCGA CAAAGGTATC GCAATCGCGG AGCAGAACTA CTTAGCCCGT
GAGCGAGTAC TTACGGCCAA ACAGGCACAA TTTACCAATG CTTTACCCCG TTTACTGGCG
CGCTACCAAG ATTGGCGCGA GCGAGTCGCT GCCTCGGGGA GTAAAGCTGC TAAATCCTTA
AGTGAGCTGT GGCGTTCGGG TGATGTGAGT ACCAGCGAGT ATTTGCAGAG TCGGCGCCAG
CTCGCGGCCA GTTATTTGGT CGGTTTAAAC CTCGAAACGG CAATTTATCA GAGTTGGTTA
ACTTGGATGG GGGACAGCGG TCAGCTGCTG CCCATGATTG ACACCTTAGC CGACACATCC
GTCGGTAAAT CAAGGTCCAC TTCTTCCACA CATGCCGTGC CAGCAAAGTA A
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| Protein sequence | MKKTIIAQTL FGLFSTLMLV GGQVHSAVAA TSGLEVNELN AEGTLLAQGE LLTEETQASL
KQWMPELLKQ INQLPEVQAQ IARQQQAELA IAAADRAIYN PELGLNYQNA DTDTYSLGLS
QTLDWGDKRG VATRLAQLEA QILLADIQLE RSQMLAERLL ALAEQAQSNK ALTFAEQQLR
FTQAQLNIAE QRFAAGDLSD VELQLLKLEL ASNTADYALA EQAALVADGK VIELLGVDKL
GFREFIPEIG QWVTQLTPKV DLPALTSAHQ QVQLAKANAM KVKADTAADP TINLGVEKEG
DDNKFGVGVA IPLQVRNNYS ELQAVADKGI AIAEQNYLAR ERVLTAKQAQ FTNALPRLLA
RYQDWRERVA ASGSKAAKSL SELWRSGDVS TSEYLQSRRQ LAASYLVGLN LETAIYQSWL
TWMGDSGQLL PMIDTLADTS VGKSRSTSST HAVPAK
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