Gene Shewana3_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0497 
Symbol 
ID4479688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp579751 
End bp580797 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content50% 
IMG OID639725030 
ProductABC transporter related 
Protein accessionYP_868143 
Protein GI117918951 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATT TTAGCAATGA TGCAAGGCAT AAACAGGCGC TTACCTTGAT GAAAAACGAG 
GCTTCATCCC AAGGACAAGT GGCGATTAAG GCCATTGGGC TTTGCAAGCG TTATGCGACG
TTTGAGGCGC TCACGGATCT TCATTTTGAA CTGCACGCCG GCCAAACTTT AGCGCTACTC
GGCCACAATG GCGCGGGTAA ATCGACCCTG ATTAAAATGA TCTTAGGGCT TGTCTCCCCA
AGCCAGGGCG AGCTATTTGT GCAGGGACAA CCTCTGCATA CCAAGCGAGC CAACGCCAAT
CTGTCATTAG GCTATTTACC TGAAAATGTA AGCTTTTATG ACAATATGAC GGCGCAGGAA
ATCTTAAGCT ATTTTGCCAA ACTTAAGGGG GTAGCCCCCA AGCGCGTATC CATTTTGCTG
GAAGAATTTG GCCTGATGGC CGCTAAGGAT AAACGCCTAA GCACCTTTTC CAAGGGCATG
CGTCAACGTT TGGGATTAGC TCAGGCGGTA TTGGCCGATC CTAAGGTGCT GCTATTGGAT
GAACCGACTG TGGGCTTAGA CCCGCTCGCA TCGGCATTTT TATATCAGAA AATGGCGCAA
CTGAAGGCGC AGGGTTGCGC CATCATTATC AGTACCCACG AGTTAGGATT AGTGCAAGAT
CAAATGGATA GTGCGCTGAT CTTAGGCCAA GGTCGGCTGC TCGCCGCAGG TGATTTATCG
CAGCTTAGGG CAATCAGCGC GCTGCCAAGT CAGCTTGAGT TGCACCGCGT TTCGCCTTGG
CAATATCAGC AGCTAATGGC TCTGCCACTG TTCGCCTCAC TGCGGAATCA CTCAAGCGCA
AACAGAGTGT GCTTTAGTGT GCCCGATGCG CTTAAGCCCA AGGTTATCGA GCAATTACAT
CTCCTTAAAA TCCATGAGTT TTCCATTGCG CCACCGAGCT TGCAGGATAT TTTCCATCAC
TTTATGGCAG GGCTGAATCG CCCTAATGCG TCAACCGTGC GCTCGGCGGT TGAAGACGAG
CAAGATCAAA GGGAGTTAGT GGCATGA
 
Protein sequence
MSHFSNDARH KQALTLMKNE ASSQGQVAIK AIGLCKRYAT FEALTDLHFE LHAGQTLALL 
GHNGAGKSTL IKMILGLVSP SQGELFVQGQ PLHTKRANAN LSLGYLPENV SFYDNMTAQE
ILSYFAKLKG VAPKRVSILL EEFGLMAAKD KRLSTFSKGM RQRLGLAQAV LADPKVLLLD
EPTVGLDPLA SAFLYQKMAQ LKAQGCAIII STHELGLVQD QMDSALILGQ GRLLAAGDLS
QLRAISALPS QLELHRVSPW QYQQLMALPL FASLRNHSSA NRVCFSVPDA LKPKVIEQLH
LLKIHEFSIA PPSLQDIFHH FMAGLNRPNA STVRSAVEDE QDQRELVA