Gene Shewana3_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0477 
Symbol 
ID4476706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp554705 
End bp555811 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID639725011 
Producthypothetical protein 
Protein accessionYP_868124 
Protein GI117918932 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA TTATCAGTAA TGCTGCGGTG GGTCGTACCC TATTGATTTT ATTGCTGTGT 
GCTGGTGTTT TCTTTTTTAT CGATTTTTTA GTTCCCGCCT TGGCCGCCCT GATCGTCTGC
TTCTCCAGTT GGCCGTTGTA CCAAAAATTA ATGGCTAAAT GCGGTGGTCG CTCGGCGCTG
TCTGCCACAA TCGCGTTGGT CTTGATTATT GTTGGGCTTA TCACGCCGCT TATTTTTGTA
TTTTCCTATG CATTACAAGA GATTCGAGCC TGGGTGGAGT GGCTGGTGTA TGCCAACCAG
CATGGCGCTC CCGTGCCGCT GTGGATTAAG GATTTACCTT GGATTGGTGA GTGGCTTACC
CTGCAATGGC AGCAGTTTAT CGGTGAACCC CATGAGCTAG GCAAGATAGT CAGCGCCATT
AGCGGTCAGA ATCTGAGTGG TATTTCTCGC TGGGTACTGC AATTGGGCTG GAATACCTTA
GGCCTGTTGC TGACTCTTCT CTTTATGCTG ATCACCTTGT TTTTCTTATA TAAAGATGGC
GAGTCGGTCG CCAAACAGCT GGATATTGTC GGCGAGCGCA TTCTTCCTGC ACGCTGGCAT
CGATTCTCCC GTGTGGTGCC TGCGACTGTG AGTTCAACCG TTATCGGCAT GACGCTTATC
GCCATCGGCG AGGGCATAGT GCTGGGGATT GCTTACTGGA TTGCTGGCGT GCCTTCGGCC
GTGGCCTTTG GGGTGTTGAC CGCGTTTATG GCCTTAGTGC CCGGCGGCGC GCCAACCATG
TTCACTTTGA TCTCACTGTA TTTAGTTGGC ACCGGCGATA TGACTGCGGG AGTGGGCTTA
TTCCTCTGGG GCAGTATCGA GCTGTTTATT GTCGATAAAA CCCTAAGACC TAATCTGGTT
GGCGGGCCAA TCAAATTACC TTTCCTGCCG ACCTTTTTCG GTTTGATTGG CGGAGTGAAA
ACCATGGGGT TCGTTGGCCT GTTTGTCGGC CCGGTATTGA TGGCGTTGCT GATTGCTATC
TGGCGCGAGT GGTTAAGGGA TGAGCCTGAT CATACGCTGG TAACCGAATC CCTTGAATCC
CCAAGGGAGC AAGGTCAGTC AAGCTAG
 
Protein sequence
MAQIISNAAV GRTLLILLLC AGVFFFIDFL VPALAALIVC FSSWPLYQKL MAKCGGRSAL 
SATIALVLII VGLITPLIFV FSYALQEIRA WVEWLVYANQ HGAPVPLWIK DLPWIGEWLT
LQWQQFIGEP HELGKIVSAI SGQNLSGISR WVLQLGWNTL GLLLTLLFML ITLFFLYKDG
ESVAKQLDIV GERILPARWH RFSRVVPATV SSTVIGMTLI AIGEGIVLGI AYWIAGVPSA
VAFGVLTAFM ALVPGGAPTM FTLISLYLVG TGDMTAGVGL FLWGSIELFI VDKTLRPNLV
GGPIKLPFLP TFFGLIGGVK TMGFVGLFVG PVLMALLIAI WREWLRDEPD HTLVTESLES
PREQGQSS