| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0435 |
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| Symbol | hemE |
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| ID | 4479342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 505704 |
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| End bp | 506768 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724971 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_868084 |
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| Protein GI | 117918892 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TAAAGAATGA TCGTTATTTA CGCGCCCTAC TAAAACAGCC TGTTGATATG
ACTCCAGTGT GGATGATGCG TCAAGCAGGT CGTTATCTTC CTGAATACAA AGCGACTCGC
GCTCAAGCGG GTGACTTCAT GTCTTTATGC AAAAACCATG AATTGGCCTG TGAAGTAACG
CTACAACCGC TGCGTCGTTA CGAGCTGGAT GCGGCGATTC TGTTTTCCGA TATTCTGACT
GTTCCCGATG CGATGGGTTT AGGTCTGTAT TTTGAGGCGG GCGAAGGCCC ACGTTTTGAG
CGCCCAACAG ACACTATCGA TGCCATCAAA AAATTAGCCG TTCCCGATCC AGAAGATGAT
CTGGGTTATG TGATGAAAGC GGTTAGCACT ATTCGCCGTG AACTGAATGG CCAAGTGCCA
TTGATTGGTT TCTCTGGTTC GCCTTGGACA CTTGCGACTT ACATGGTTGA AGGCGGTTCG
AGCAAAACCT TCGAAAAAAT TAAGAAGATG GCCTACGCAG AGCCAGCGGC ACTGCATATG
TTACTCGACA AGTTAGCCGA TTCAGTGACT CTGTACCTGA ATGCACAGGT TGCTAACGGC
GCGCAATCGC TGATGATTTT CGACTCATGG GGCGGCGCGT TATCGCACAC GGCTTACCGT
GAATTCTCAC TGCGTTATAT GCAGAAGATT GTCGATGGCC TGACTCGCTT TGCCGATGGC
CGCCAAGTGC CAGTGACCTT ATTCACTAAG GGCGGTGGTT TATGGTTAGA AGCTATGGCA
GAAACGGGCT GTGATGCTTT AGGGTTAGAC TGGACTGTCG ATATTGCCGA CGCCCGTCGC
CGTGTTGGTC ATAAAGTGGC ACTGCAAGGC AACATGGATC CATCTATGCT GTACGCACCA
ATTCCACGTA TCGAAGAAGA AGTGGCTCAA ATTCTGGCGG GCTACGGTGA AGGTACAGGC
CATGTGTTTA ACTTAGGCCA TGGTATTCAC CAGCACGTTG ACCCTGAGCA TGCAGGTGCC
TTTATCAAGG CGGTTCATGC TCAATCTAAG CAGTACCATA AGTAA
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| Protein sequence | MAELKNDRYL RALLKQPVDM TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNHELACEVT
LQPLRRYELD AAILFSDILT VPDAMGLGLY FEAGEGPRFE RPTDTIDAIK KLAVPDPEDD
LGYVMKAVST IRRELNGQVP LIGFSGSPWT LATYMVEGGS SKTFEKIKKM AYAEPAALHM
LLDKLADSVT LYLNAQVANG AQSLMIFDSW GGALSHTAYR EFSLRYMQKI VDGLTRFADG
RQVPVTLFTK GGGLWLEAMA ETGCDALGLD WTVDIADARR RVGHKVALQG NMDPSMLYAP
IPRIEEEVAQ ILAGYGEGTG HVFNLGHGIH QHVDPEHAGA FIKAVHAQSK QYHK
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