Gene Shewana3_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0388 
Symbol 
ID4478970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp450091 
End bp450420 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID639724924 
Productfrataxin family protein 
Protein accessionYP_868037 
Protein GI117918845 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1965] Protein implicated in iron transport, frataxin homolog 
TIGRFAM ID[TIGR03421] iron donor protein CyaY 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.867162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA CAGATACAGA ATTTCACCAG CTCGCCGATG ACATGTTCCA AGCGATAGAG 
ACCGCTATCG AAACCGCAAT TGATGAACAA GACGCCGATG TCGATATTGA TGCCAGCGGT
AACGTGTTAC AGCTGGAATT TGTAGATGGT TCGAAAATTG TCATCAACAA ACAAGAGCCT
TTGCATGAGA TTTGGGTTGC GACCCGTTTC GGTGGCTATC ACTTTGGTTT TGTTGATGGT
AAATGGATTG ATGGTCGTAA TGGCGGCGAG TTTATGCCCT TTGTACAGGA CTCCATCCTT
CGCCAAAGCG GTATCGCACT GAGCTTCTAA
 
Protein sequence
MAMTDTEFHQ LADDMFQAIE TAIETAIDEQ DADVDIDASG NVLQLEFVDG SKIVINKQEP 
LHEIWVATRF GGYHFGFVDG KWIDGRNGGE FMPFVQDSIL RQSGIALSF