Gene Shewana3_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0326 
Symbol 
ID4479062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp360461 
End bp361714 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID639724858 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_867975 
Protein GI117918783 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GCAATCCCCT AGGCAGACGA GTCGTCGTTA CTGGTATCGG TGGCATCAGT 
GCCCTAGGCC ATGACTGGCC GAGTATCGCA AGCAGCCTTA AGGCACAAAA AAACTGTGTC
GTGACGATGG CGGAATGGGA TAAATATGAC GGGCTGAACA CCCGCTTAGC TGCACCTATT
ACTGACTTTG AGGTGCCGAG CCACTATTCC CGCAAAAAGA TCCGCTCCAT GGGACGCGTC
TCGATTATGG CGACTCGCGC CAGCGAACTT GCGCTGATGG ATGCTGGACT CTTGGACGAT
CCTATCGTCA CCTCGGGGGA AATGGGGATT GCCTATGGTT CTTCCACCGG CAGTACTGAC
CCGCTGGTCG CCTTTGGCGA TATGCTCAAA AATGGCGATA TGTCAGGCGT CACCGCCACC
AGCTATATCC GCATGATGGC ACACACCACT GCGGTAAACG TGGGGGTATT CTTTGGTCTT
AAGGGACGCA TTCATACCAC CAGCAGCGCC TGTACTTCGG GCAGCCAAGG CATAGGTTAC
GCCTATGAGG CCATCAAATA CGGGCAACAG ACCTTAATGC TCGCGGGCGG CGGTGAAGAA
CTCTGCCCGA CCGAGGCCGT GGTATTCGAC ACCCTGTTTG CCACCAGCAC TAAAAATGCC
ACCCCTGAGT TAACGCCTCG CCCCTTCGAT GCCCATCGCG ACGGTTTAGT GATTGGTGAA
GGCGCTTGTA CGCTGGTACT CGAAGAGTTA GAACACGCCA TGGCGCGCGG CGCGAAAATT
TACGCCGAGA TCGTCGGTTT TGGCACTAAC TCCGATGGTC AGCATGTGAC TCAGCCCAAT
AGCGATACCA TGGAAATCGC CATTCGCTTA GCCCTTAAGG ATGCGGCGCT CACGCCCGAT
GCCATTGGCT ATGTAAATGC CCACGGCACA GCCACCGATC GTGGTGACGT TGCCGAAACC
CATGCAACGC ATGCAGTATT TGGTGCGGAT ATGCCGATTT CATCCCTGAA AAGCTACACA
GGCCATACCT TAGGTGCCTG CGGCGCGTTA GAGGCATGGG TCAGTATCGA AATGATGAAT
GCGGGCTGGT TTGCCCCCAC GCTTAATCTC GACAATATCG ACCCAGAATG TGCCGCACTC
GATTACATTC GCGGCGAGCC ACGTACACTC GACACTGACT ATGTGATGAG CAATAACTTC
GCCTTTGGCG GCATCAACAC CTCACTGATT TTTAAACGCT GGAAAACGAC ATAA
 
Protein sequence
MTQRNPLGRR VVVTGIGGIS ALGHDWPSIA SSLKAQKNCV VTMAEWDKYD GLNTRLAAPI 
TDFEVPSHYS RKKIRSMGRV SIMATRASEL ALMDAGLLDD PIVTSGEMGI AYGSSTGSTD
PLVAFGDMLK NGDMSGVTAT SYIRMMAHTT AVNVGVFFGL KGRIHTTSSA CTSGSQGIGY
AYEAIKYGQQ TLMLAGGGEE LCPTEAVVFD TLFATSTKNA TPELTPRPFD AHRDGLVIGE
GACTLVLEEL EHAMARGAKI YAEIVGFGTN SDGQHVTQPN SDTMEIAIRL ALKDAALTPD
AIGYVNAHGT ATDRGDVAET HATHAVFGAD MPISSLKSYT GHTLGACGAL EAWVSIEMMN
AGWFAPTLNL DNIDPECAAL DYIRGEPRTL DTDYVMSNNF AFGGINTSLI FKRWKTT