| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0283 |
|---|
| Symbol | |
|---|
| ID | 4479191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 316368 |
|---|
| End bp | 317603 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639724815 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_867932 |
|---|
| Protein GI | 117918740 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.143698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000382002 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCTGTTTG CCCTTTATCG GCAACTCATT ATCGAACAGC AGTACCAAGT GACTCAGTAT
CTTGAGTCAG AAACCCAACG CTATCAACAG CTTGCGCTTA CAGTTGATCG CCGCAGTTTT
GCGGCACAAA TTCGTGCAGC CGATCCGCAG ACGGCGCTCA TCGCTTGGCG TAACAGTTAT
GACATGGTTG GTGCCTTAAG CTTTATGCCT GAAGGCATGC CCATGCTGCC GCAAACCCGG
GATTTCCCGA TTTTAACTGG TGGCCCTGAT AAGCTGCATA TCCTCACCGG CGGCCTAGTG
ATGACTCGCT ATGGCCCTGT GCTCATCGCC ACCCGTACCG ATAACTTAGC CACCTTGATC
GATAAATTTA TCAGTGCGGC GGCCACGGCC GTGATGTTGA CCATAGTGTT AACCTTAGCG
TTGGGCTATT TGTTTTCTAA GGCGATTTTG CGCCGCTTAG TGCAGTACAA TCGCTTGAGT
GAGCAAATTG AGCGGGGGCA TTACGACACG CGTCTGCCGC TCAGTTGGCG TCAGGACGAG
TTCGATATGT TGGCGCTGCA GTTTAATAAC GTGCTGGATA TTCTTGAGAA TAACCTGATG
GCGGTGCGCG GGGTGACAGA TAATATTGCG CACGACTTGC GCACGCCCTT ATCCCATATT
CGCATCGGTC TTGAGGAGTT GGCGGCCAAA TCCCCCGATG AAATCAGCGA AGGTTGCGCG
ATTTTGACCG AAGAGCTCGA TCATTGTCTT GCGACCTTCG ATGCCATGCT CTCGCTGACA
CGCATTGAGG AAGGGCAGCA AACCTTAGAT TTGCAGGAGC TGAGTTTGGC GCAGCTATGT
ACCGATTTGT TGGACATGGC CGACGCGGTC GCCGAGTCGA ATGAGCAAAC CTTGAGTCTG
TCGCTCCTAT CGGATCATAA GATTTATGGT GACAAGTACT TGTTGTTCCA AGCCTTATAT
AACTTGGTCG ACAATGCGAT GAAGTACTCA GGTCAAGGCG CTCGCATCGA TATTATTCAA
TCCGGCGCTA AAATTAAGAT TTGCGATAAC GGCCCAGGGA TCCCCGATGA CAGCAAGGAA
AGAGTGTTTG AGCGTCTAGT GCGTCTCGAC CCCAGCCGCC ATTTGCAGGG CACGGGTTTA
GGATTATCTA TGGTAAAAGC GATTATGTCG CGGCACAATG CGCAAATTAC TCTTTCGGAT
AATCATCCCG GCCTAGTGGT GACCATTCAG TTTTAG
|
|---|
| Protein sequence | MLFALYRQLI IEQQYQVTQY LESETQRYQQ LALTVDRRSF AAQIRAADPQ TALIAWRNSY
DMVGALSFMP EGMPMLPQTR DFPILTGGPD KLHILTGGLV MTRYGPVLIA TRTDNLATLI
DKFISAAATA VMLTIVLTLA LGYLFSKAIL RRLVQYNRLS EQIERGHYDT RLPLSWRQDE
FDMLALQFNN VLDILENNLM AVRGVTDNIA HDLRTPLSHI RIGLEELAAK SPDEISEGCA
ILTEELDHCL ATFDAMLSLT RIEEGQQTLD LQELSLAQLC TDLLDMADAV AESNEQTLSL
SLLSDHKIYG DKYLLFQALY NLVDNAMKYS GQGARIDIIQ SGAKIKICDN GPGIPDDSKE
RVFERLVRLD PSRHLQGTGL GLSMVKAIMS RHNAQITLSD NHPGLVVTIQ F
|
|---|
| |