| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0250 |
|---|
| Symbol | |
|---|
| ID | 4479158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 280166 |
|---|
| End bp | 281686 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639724782 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_867899 |
|---|
| Protein GI | 117918707 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000231621 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATG CTCAACCCGG AACCGCTGGT GCCATCGTTA ACTTTAAAGA AAAATACGCC
AACTTTATCG GTGGCAAATG GGTCGCCCCA GTCAACGGCG ATTACTTTGA AAATCGCTCT
CCCGTCAATG GTCAAAACTT CTGTAAAATT CCCCGCTCCG ACTACCGCGA TATCGAACTG
GCGCTCGATG CTGCCCACGC AGCTAAGGAT GCTTGGGGCA AAACCTCAGT CACCGAGCGT
GCCAATTTAC TGTTGCGTAT CGCCGATCGC GTTGAGCAAA ATCTCGAATA CTTAGCCGTT
GCCGAAACCT GGGAAAACGG TAAAGCAGTG CGTGAAACCC TCAACGCCGA CTTACCTCTG
TTTGTCGACC ATTTCCGTTA CTTCGCCGGC TGCATTCGAG CACAGGAAGG AAGCGCAGCC
GATATCGATG GCAACACCGT CAGCTACCAC TTCCCAGAGC CATTAGGTGT CGTCGGGCAA
ATCATTCCGT GGAACTTCCC GTTGTTGATG GCTGCGTGGA AAATCGCCCC CGCACTCGCC
GCGGGCAACT GCGTAGTACT CAAACCCGCA GAGCAAACGC CCGTATCTAT CCTTGTGCTG
CTCGAACTGA TTGAAGATCT GCTGCCGCCC GGCATCCTTA ACGTCGTCAA CGGTTTTGGC
GCCGAAGCGG GTCAAGCCCT CGCCACCAGC AAACGCATCG CTAAACTGGC CTTTACTGGC
TCCACCGAAG TCGGTTACCA CATCTTAAAA TGTGCCGCGG AATCGCTGAT CCCATCGACA
GTCGAACTCG GCGGTAAATC GCCTAACCTG TATTTCGCCG ATGTGATGGA CCACGAAGAC
GAGTATTTAG ATAAGGCCGT CGAAGGCATG TTGCTGGCCT TCTTCAACCA AGGTGAAGTC
TGTACTTGCC CATCACGGGT ATTGATCCAA GAGTCGATTT ACGATCGCTT TATCGAAAAA
GTTCTCGCCC GTGCGCAAAC CATCAAGCAG GGCAACCCGC TGGATACCGC CACCCAAGTG
GGCGCACAGG CCTCCCAAGA ACAGTTCGAT AAGATTTTAA GCTATCTCGC AATTGGTAAA
GATGAAGGCG CACAGGTGCT CTTAGGCGGC TCGCTCTGCC AACTCGAAGG CGATCAAAGC
AAGGGCTATT ACATCAGCCC AACGATCATG AAAGGTCATA ATAAGATGCG GATTTTCCAA
GAGGAAATCT TCGGTCCGGT TATTTCGGTC ACCACCTTCA AGGATGAAGC CGAAGCCTTG
GCAATTGCCA ACGATACCGA ATACGGCCTT GGTGCGGGTG TATGGACGCG GGATATGAAC
CGCGCTCAGC GTCTAGGTCG AGGCATTCAA GCGGGTCGAG TTTGGATTAA CTGCTACCAC
GCCTATCCCG CCCACGCAGC CTTTGGTGGT TATAAGAAGT CAGGCATCGG CCGTGAAACC
CACAAGATGA TGCTTAATCA CTATCAAAAC ACCAAAAACC TATTGGTGAG CTACGATATC
AATCCGCTCG GGTTCTTCTA A
|
|---|
| Protein sequence | MIYAQPGTAG AIVNFKEKYA NFIGGKWVAP VNGDYFENRS PVNGQNFCKI PRSDYRDIEL
ALDAAHAAKD AWGKTSVTER ANLLLRIADR VEQNLEYLAV AETWENGKAV RETLNADLPL
FVDHFRYFAG CIRAQEGSAA DIDGNTVSYH FPEPLGVVGQ IIPWNFPLLM AAWKIAPALA
AGNCVVLKPA EQTPVSILVL LELIEDLLPP GILNVVNGFG AEAGQALATS KRIAKLAFTG
STEVGYHILK CAAESLIPST VELGGKSPNL YFADVMDHED EYLDKAVEGM LLAFFNQGEV
CTCPSRVLIQ ESIYDRFIEK VLARAQTIKQ GNPLDTATQV GAQASQEQFD KILSYLAIGK
DEGAQVLLGG SLCQLEGDQS KGYYISPTIM KGHNKMRIFQ EEIFGPVISV TTFKDEAEAL
AIANDTEYGL GAGVWTRDMN RAQRLGRGIQ AGRVWINCYH AYPAHAAFGG YKKSGIGRET
HKMMLNHYQN TKNLLVSYDI NPLGFF
|
|---|
| |