| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0190 |
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| Symbol | rplJ |
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| ID | 4477962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 228916 |
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| End bp | 229416 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724719 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_867840 |
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| Protein GI | 117918648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000177262 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000758972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCATTAA GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA
GGTGCGCTAT CTGCAGTAGC CGCTGATTCA CGCGGTGTAA CTGTAGGTGC TATGACCGGT
CTGCGTAAAA AAGCTCGTGA AGCTGGTGTT TATGTACGTG TAGTACGTAA CACTCTAGCT
CGTCGTGCTG TTGAAGGTAC TGCATTTGAG TGCCTAGCAG AAACGTTCAC TGGCCCAACT
TTGATTGCTT TCTCTAACGA GCACCCAGGT GCTGCAGCTC GTCTGTTAAA AGACTTTGCT
AAAGAGCAAG CTAACTTCGA AGTTAAAGGC GCAGCCTTTG AAGGGAATTT CATCCCTGCA
GCTGACATTG ATCGTTTGGC GAAACTGCCA ACATACGAAG AAGCACTAGC ACAGTTAATG
ATGACTATGA AAGAAGCATC TGCTGGCAAG TTCGTTCGTA CTCTGGCCGC CCTGCGCGAT
CAAAAACAAG AAGCCGCTTA A
|
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| Protein sequence | MALRLEDKKA IVAEVNEAAK GALSAVAADS RGVTVGAMTG LRKKAREAGV YVRVVRNTLA
RRAVEGTAFE CLAETFTGPT LIAFSNEHPG AAARLLKDFA KEQANFEVKG AAFEGNFIPA
ADIDRLAKLP TYEEALAQLM MTMKEASAGK FVRTLAALRD QKQEAA
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