Gene Shewana3_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0126 
Symbol 
ID4477275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp142852 
End bp143262 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content47% 
IMG OID639724646 
Productflagellar basal body-associated protein FliL-like protein 
Protein accessionYP_867776 
Protein GI117918584 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.177877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000178382 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TATTATCAGC CTGCCTGATC TTATTCAGTG TTGTATTGAG TGCATATGCG 
GCCGACGAGA AAGAAGCGAC TCCCGCTGGG GATTATGCTT ACTACGGTTT CGAACCCGAA
ATCGTGACTA ACTATATTTC AAACCGCAAA AAACTGGGGT TTGTGAAGAT CAGTGTCGAG
CTGATGGTCA AAAATCCCGA TGATCTCGTC ATTGTCGAGC GCCACGATCC GCTGCTGCGC
GCCGCGATTA TCGAAGTGCT TGGTAATCAG GCCGAAGAAA AGATTAAGTC CCTCACTGGC
CGTGAAGAAA TCCGCCGTGA GTGCTTCGAT ACGGTGAATA ATCTGCTGAC CAAAGAAGCG
GGTAAGCCCT TAGTGGTCAA CCTACTGTTT ACCTCCTATC TTTACGATTA A
 
Protein sequence
MKKLLSACLI LFSVVLSAYA ADEKEATPAG DYAYYGFEPE IVTNYISNRK KLGFVKISVE 
LMVKNPDDLV IVERHDPLLR AAIIEVLGNQ AEEKIKSLTG REEIRRECFD TVNNLLTKEA
GKPLVVNLLF TSYLYD