Gene Shewana3_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0119 
Symbol 
ID4477268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp134716 
End bp135276 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID639724639 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_867769 
Protein GI117918577 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0038904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTACAC ATTTATGCCG CTGGCTACTT AAGATTTCAG GCTGGCAAAT CCAAGGGCAG 
TTACCCTCTC AAGCCAAATA CATTGTGATT GTTGCGCCAC ACACCAGTAA CTGGGACTTC
ATCATCGGCG TGCTCGCCCG CGGCGCCTTA AACACCCGCA TACACTTCCT CGGTAAGCAT
CAATTGTTTA TTCCGCCTTG GGGTTGGTTC TTCCGTGCTA TCGGTGGCAG CCCAGTGGAC
AGGCGTAAAA ACAATAACTT AGTCGATGCT GCGGTGCAGT TATTTGCCAC CCAACCCGAC
TATAAACTCG CGCTCGCCCC CGAAGGTACT CGCAGTCCAG TGACTCGCTG GAAATGCGGC
TTCTACCATA TCGCCTCCAA GGCGCAGGTG CCCATAGTGC CAGTGGGCTT AGACTTTGCC
CGTAAGGCCG TGGTGATCCA ACCGCCACTG CAACCAAGGG AAATCGAGCA AGATATGGCG
GAAATCCTCA GTTTTTACCG CAGCATTAAA GGGCGTCATC CCAAAACGAT CCCCGACTAT
ACGCCAGACA ACAGACGTTA A
 
Protein sequence
MFTHLCRWLL KISGWQIQGQ LPSQAKYIVI VAPHTSNWDF IIGVLARGAL NTRIHFLGKH 
QLFIPPWGWF FRAIGGSPVD RRKNNNLVDA AVQLFATQPD YKLALAPEGT RSPVTRWKCG
FYHIASKAQV PIVPVGLDFA RKAVVIQPPL QPREIEQDMA EILSFYRSIK GRHPKTIPDY
TPDNRR