Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0049 |
Symbol | |
ID | 4477985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 57828 |
End bp | 59033 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639724569 |
Product | C-terminal processing peptidase-3 |
Protein accession | YP_867700 |
Protein GI | 117918508 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000124234 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAC TAATCCGCAA TATCGTCTGC CTTGGGCTCG GCCTAAGCCT AGGTCTGTCC ATTAGCCTCT CCAGCCAAGA GAATGCCAAG TCATATCAAA GTGACTTCGA CTACCCGCTA TTGCAGGATG TATTAGAAAC CGTCGAAACC TATTACGTTA AAACCGTTTC CAAAGATGAG CTGGTGCAAG CCGCCATTAA AGGGATTTTT GAGCATTTAG ATCCCTATTC CAGCTTTTTA AATCACCAAG AATTACTCGA CTTAAAAGAC TCAAATCGGG GCGAATACTT TGGCTTTGGC TTTGAGGTCG CCAGCGATAA AGACCATATC AGCATTATCG CGCCCTTTGC CAATTCCCCC GCCGAACAGG CCGGTATCCA AGCGGGCGAT ATCATTATCA AGCTGAATGA CACGCCAACC ACCGAAACCA ACCTTGCGGA TATCCTCAAT CAAATCAAAC AACATAGCCT CAGCAATCAG AGTATTCACC TCACACTGAA GCACCATAAT GATGACGCCC AGTTCGAGGT ATCACTCAAA CCCAGTACCA TCACCATTCA ATCTGTCACC AGCAAATTAC TGGATGGTAA TATCGGCTAC GTTAGGCTCA GTAGCTTTCA AGAGAACTCC ACCGAAGACA TGGTGCGCAG TTTAAGCCAG TGGCAAAACG CGCATCTTAC GGGTTTGATA TTAGATTTAC GTAATAATCC CGGCGGCTTG CTGGATCAGG CAATCAAAAT CGCTGACCTC TTTTTAGCGA AGGGCCGAAT CGTCTCAACC TCTGGCCGCT TTTTCGATGC CAACTCCGAC TATTACGCCT CACCGCAAAC CATGCTGACC AATGTGCCTA TGTTAGTGCT GATCAACAAA GGCTCGGCCT CCGCCTCCGA AGTCCTCGCT GCCGCCCTGC AGGAAAATGG CCGCGCCAAA CTGCTTGGTG AAACTAGCTT TGGCAAAGGC ACGGTGCAAA GCCTGATCCC CATACTGAAC GACGGCAATG CCATCAAGCT CACCATCGCC CAGTACAACA CCCCCAGAGG GGAAAACATT CACGATATCG GCATAGTGCC CGACATTAAA GTTGCAACCG AAACTGGCTC CAATCAAAAG AATATGGCTA TAATCGACGC CATCTCAGCA CGAACCGATG TTAGCCAAGA CAGCCTAGTC ACCTCGGCAA TCGCTTGGAT GCAACATCAT GACTAA
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Protein sequence | MKQLIRNIVC LGLGLSLGLS ISLSSQENAK SYQSDFDYPL LQDVLETVET YYVKTVSKDE LVQAAIKGIF EHLDPYSSFL NHQELLDLKD SNRGEYFGFG FEVASDKDHI SIIAPFANSP AEQAGIQAGD IIIKLNDTPT TETNLADILN QIKQHSLSNQ SIHLTLKHHN DDAQFEVSLK PSTITIQSVT SKLLDGNIGY VRLSSFQENS TEDMVRSLSQ WQNAHLTGLI LDLRNNPGGL LDQAIKIADL FLAKGRIVST SGRFFDANSD YYASPQTMLT NVPMLVLINK GSASASEVLA AALQENGRAK LLGETSFGKG TVQSLIPILN DGNAIKLTIA QYNTPRGENI HDIGIVPDIK VATETGSNQK NMAIIDAISA RTDVSQDSLV TSAIAWMQHH D
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