| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3853 |
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| Symbol | |
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| ID | 4924017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4583284 |
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| End bp | 4584162 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640165479 |
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| Product | parB-like partition protein |
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| Protein accession | YP_001095975 |
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| Protein GI | 127514778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0431793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000203867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACACCCA AAAAACGTGG TCTAGGCAAA GGATTAGACG CACTGTTAAG CACTAGCCAT
GCGGCGGCAA GACAGGCCCC GATGCAAGAG GCCGAGCCGA ATAATAACGA AGAGCTCAAG
ATGATTGCCC TGGATCTGCT GCAGCCAGGC AAGTATCAGC CCCGCAAGGA TATGTCGCCC
GAGGCGCTGG AGGAGCTGGC TGAGTCGATC AAGACCCAGG GGATCATTCA GCCTATCGTA
GTGCGTAAGG TGTCGGACAA AGGCTATGAG ATCATCGCCG GTGAGCGTCG CTGGCGCGCA
TCGCAACTGG CTAAACTCGA CAAGGTGCCC TGTATCGTCA AACAGGTGCC AGACGAGGCT
GCCGGTGTTA TCGCCTTAAT CGAGAACATT CAGCGTGAAG ATCTTAACGC GATGGAAGAG
GCTATCGCGC TAGAGCGCCT GATCAAGGAG TTCGAACTGA CCCATCAACA GACGGCCGAT
GCCGTGGGTA AGTCGCGCAC GACTGTATCA AACCTATTAC GTTTGAATGG CTTAGAAGAG
CCTGTTAAGC GCATGCTGGA ATATGGCGAT ATCGATATGG GGCATGCCCG TGCCCTGCTC
GCATTGCCTG GTGATGAGCA AACTAACCTG GCCAGAACCG TGATTGCCAA AGAACTAACT
GTTCGTGAAA CTGAACGATT AGTGAATAAA ACCTTAAATC CACCTGAAAT TGTCGATAAA
CCCGCAAAAG ATCAGGATGT CGCCCGTCTA GAGAGCCAAT TAATTGAAAA ATTAGGGGCA
AAAGTTTCCA TTAGCCATAA CAAAAAAGGC AAGGGCAAAA TGGTAATTAA CTATCAAAAT
TTGGCTGAAT TGGATGGTAT TATTGAGAAA ATCCGTTAA
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| Protein sequence | MTPKKRGLGK GLDALLSTSH AAARQAPMQE AEPNNNEELK MIALDLLQPG KYQPRKDMSP
EALEELAESI KTQGIIQPIV VRKVSDKGYE IIAGERRWRA SQLAKLDKVP CIVKQVPDEA
AGVIALIENI QREDLNAMEE AIALERLIKE FELTHQQTAD AVGKSRTTVS NLLRLNGLEE
PVKRMLEYGD IDMGHARALL ALPGDEQTNL ARTVIAKELT VRETERLVNK TLNPPEIVDK
PAKDQDVARL ESQLIEKLGA KVSISHNKKG KGKMVINYQN LAELDGIIEK IR
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