| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3836 |
|---|
| Symbol | |
|---|
| ID | 4924240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4565860 |
|---|
| End bp | 4566213 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640165462 |
|---|
| Product | IS66 Orf2 family protein |
|---|
| Protein accession | YP_001095958 |
|---|
| Protein GI | 127514761 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000173309 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAA TGCTGAGTGC CCCTAATGTT TACCTGTATC GGGAGTTCGT GGATTTTAGA
AAGTCCATTA ATGGTCTGGC GGCGATTATT GAATCTGAAA CCGATTTACC GCTCGGAAGC
GGTGCGCTGT TCCTGTTTAC CAATAAACAA CGCGACAAAA TCAAAGTCTT GTATTGGGAT
AAAACAGGCT TCGCTCTGTG GTATAAGCGG CTGGAAAAAG CCAAATTCAA ATGGCCCACT
CAAGAGAAAA AACAGGTATA CACCCTGACT CAATTTGACT TAGACAGGCT GTTATCTGGC
TTCACTATAA TCGGTCGCAA ACCGATAAAA ATAGACAATT TTACAATGAG TTAA
|
|---|
| Protein sequence | MKRMLSAPNV YLYREFVDFR KSINGLAAII ESETDLPLGS GALFLFTNKQ RDKIKVLYWD
KTGFALWYKR LEKAKFKWPT QEKKQVYTLT QFDLDRLLSG FTIIGRKPIK IDNFTMS
|
|---|
| |