Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3760 |
Symbol | |
ID | 4920752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4477818 |
End bp | 4479446 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640165386 |
Product | KAP P-loop domain-containing protein |
Protein accession | YP_001095885 |
Protein GI | 127514688 |
COG category | [R] General function prediction only |
COG ID | [COG4928] Predicted P-loop ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0432517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCAC AAATTATGAT TGATTGGTCA AGCCCACTTC AAACAGAAGA CGGCAGGGAG AACTTCCCTG CCGACCAGCT AGATCGCGCA AAATATGCGG AGTTTCTGAC ACATTTTTTG GCTTCTAAGG GAGCTGGTAG TTCAGACGAG AGACATAACT ATGTATTAAA TTTGAACGCC GAATGGGGAG CTGGTAAATC TTACTTCCTG CGTCGCTGGG CGGCAGAATT GAAAGAGAAA TACCCCGTTG TTTATGTAGA CGCTTGGAAG CAAGACTACT CAGACGATCC CTTAATGACT GTCATCTCAT CGATGATAAA GCAGTTAAGA GAACAAGCAG GGAAAAGCGA AGAAGATCCT CTATTTAAAA CACCACGTAA ATTAATAGGC TTACTCAAAG CTGCCGCGCC AAGCATTGCA AGAGGAGTTG CAACCAAATA CTTAGGTATA GATCCCGTAA AAATCATTCA ACAAGCTGAT GATGACGATA TTGGTGAGAC GGTTAAAGAC CGAAATGGAC AAGATATCGA TATGGGGCTA GCAGCCTCTA AAATAGTCGA ACACTTAATC AAGGATCACG ATGCCAAATC TGATGCAATA GCCAGTTTAA AGCTAAGTGT TGAAGAGTGG GTCAGAGCCG TCGCCGGACT TCGAGAAAAG CAGCATCCCG CATTTATATT TATCGATGAA CTCGATCGAT GCAGGCCTAG TTATGCGGTT GAAATGCTGG AGACGATCAA GCACATTTTC GATATTCCCG GCGTGGTATT TGTCGTTGCC ACTGATACAG AACAACTACA ACACACAATA AAGGCGATCT ACGGCGAAGG CTTCGATGCC CGCACCTACC TTGGCAGGTT CTTTAACAGT CGTTACACCC TAAAGGCACC CTCTTTTGAA AAGTTACTTT CAGTTCATTG TGATATGAAA AAATTATCTG AATCATACTT TAACGATAGA AATATCGAGA ACTGGCCAGA ACTTGATGTC CAGAGTGAAG GCTCTGATTT AATACCACTC AAAAATCTAA CGACCATGTA TAACGTCTTT TCGTTATCGG CAAGGCAAGT CATTCAAACA ACAGAACGCC TCATTTCTGT TGTCGAAAAT CTAAAGACCA ATTCACACAT AAACCTGCTC TATCTAGCAT TCCTGCTCTG TCTGAGAGAG AAAAATCAGA TGTTATATGA CTTAGTTTTA ACAAAGGATT TGATACATCA ACTTGATAAT AAAAAACAAT TACATTACGA ATTAATGGAA ATAGTTTCGG CCAGTGACCC AGAAAAATTA AGTTTCAACC TAAAGCCGAG TAATTTATTT TCAGTCGGAC ATGCCAACTA TTTAAACTCT ATAGCAGACA ACCTTATTTC AGATGGGCAA TATGAATTAG GTGTTTACCA ATTTATAGAG GTCTCACATA CTCTCATAAA ATCAGTTTCA AGAATCTCAA ACCTTAGGAA TGAGGCCATT CGTTCTTTGT CAAATAGGAA TCAAACTCCA GATATAAAAA ATTGGTTTGT TATTATCGCT GAAATTGAAA ATAAAAAAAG TAACTATAAC AATTCGGCAT ACAAGGATTT AGTCGAACTC GCTTCCGCAC TAGATGTACC TGAATCAAAA ATTGCATAA
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Protein sequence | MASQIMIDWS SPLQTEDGRE NFPADQLDRA KYAEFLTHFL ASKGAGSSDE RHNYVLNLNA EWGAGKSYFL RRWAAELKEK YPVVYVDAWK QDYSDDPLMT VISSMIKQLR EQAGKSEEDP LFKTPRKLIG LLKAAAPSIA RGVATKYLGI DPVKIIQQAD DDDIGETVKD RNGQDIDMGL AASKIVEHLI KDHDAKSDAI ASLKLSVEEW VRAVAGLREK QHPAFIFIDE LDRCRPSYAV EMLETIKHIF DIPGVVFVVA TDTEQLQHTI KAIYGEGFDA RTYLGRFFNS RYTLKAPSFE KLLSVHCDMK KLSESYFNDR NIENWPELDV QSEGSDLIPL KNLTTMYNVF SLSARQVIQT TERLISVVEN LKTNSHINLL YLAFLLCLRE KNQMLYDLVL TKDLIHQLDN KKQLHYELME IVSASDPEKL SFNLKPSNLF SVGHANYLNS IADNLISDGQ YELGVYQFIE VSHTLIKSVS RISNLRNEAI RSLSNRNQTP DIKNWFVIIA EIENKKSNYN NSAYKDLVEL ASALDVPESK IA
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