| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3743 |
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| Symbol | |
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| ID | 4920918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4457143 |
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| End bp | 4457709 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165369 |
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| Product | chorismate lyase |
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| Protein accession | YP_001095868 |
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| Protein GI | 127514671 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.219217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000343394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTGTGA CCAGGTTAAG CTTCCCCTAT GGTGAATCCA TTCAATGGCA TTCACCGGAT
CAAATTCCCC AGCTGCCACC GAGCCCTTTC AGGGAGTGGC TGTTAGCTTC CGGTAGTTTA
ACCCAAAAAC TCAAGTCTCA CTGCAATCAA TTTGAGGTCA AGGTGTTAGG CGAGGCCATG
TTGCCTCCCT TCCCGGGCGA ATTGCCCCAC CAAGGGCAAG CCTGGATTAG AGAAGTGCTG
CTCTGTCTCG ATGGCATACC TTGGGTATTT GCCCGCACAC TCGTGCCCGG CGCCATGATG
GACAGCGCCC AGGATAACTT CCTCTCGCTG GGCACCCGGC CCTTGGGCGA GCTGCTGTTC
ACCAGTGGCG ATTTCACCCC GGGCAAGATA GAGGTCGGCG AGTTTACCGC CTGCGACTCC
CTCGCCAAAC TGATCGATTC GCTCGAGCAG GAGAGTCACC ATCCCTTGTG GGGCCGCAGA
CGCTACTTCA GCCATGGAGA CCAGCAGCTG ATCGTCAGCG AGATCTTCCT GCCCAAGGCT
CGCCAGCTCA TCGACCGGCT GGCATAA
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| Protein sequence | MSVTRLSFPY GESIQWHSPD QIPQLPPSPF REWLLASGSL TQKLKSHCNQ FEVKVLGEAM
LPPFPGELPH QGQAWIREVL LCLDGIPWVF ARTLVPGAMM DSAQDNFLSL GTRPLGELLF
TSGDFTPGKI EVGEFTACDS LAKLIDSLEQ ESHHPLWGRR RYFSHGDQQL IVSEIFLPKA
RQLIDRLA
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