| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3730 |
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| Symbol | |
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| ID | 4921024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4443595 |
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| End bp | 4444152 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165356 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001095855 |
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| Protein GI | 127514658 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0238268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00736647 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTACAGC AAGATCCCGC TGCCCTAGTT GAAACGGTAC TGCAAGGAGG CGTCATAGCC
TATCCGACCG AGGCCGTTTA TGGGCTGGGT TGTGACCCCG ACAACGATGA GGCGATTCAG
AAGCTGCTGG ATTTAAAGCA GCGTCCATGG CAGAAAGGTT TGATCTTGGT CGCCAGCGAT
TTCAATCAGT TAACGCCCTA TATCGATAGT TCTGTCCTCA CCGAGGCACA GCTACAGTCG
GCCTTCGACA AGTGGCCAGG CCCCTTTACC TTCATCATGC CGAAACGACC AGGGCTCTCT
AGCCTCTTGA GTGGTCAGTT TGACTCCCTC GCCGTGCGCG TCTCCAATCA TCCTGGCGTG
CAGGCGCTGT GTCAGGCGCT GGGTAAGCCC ATCGTCTCGA CCAGTGCCAA CCTGACCGGG
GAAGAGCCCG CCTTGACTCC AGAGGAAGTC ATACGTCAGT TTGATGGCAA GATAGATGGT
CTGGTGGCCG GTAGCCTTGG CGCCGAGCCT AAACCATCGA CCATCATAGA TGTGATCAGC
GGAAAGATTT TACGATAA
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| Protein sequence | MLQQDPAALV ETVLQGGVIA YPTEAVYGLG CDPDNDEAIQ KLLDLKQRPW QKGLILVASD
FNQLTPYIDS SVLTEAQLQS AFDKWPGPFT FIMPKRPGLS SLLSGQFDSL AVRVSNHPGV
QALCQALGKP IVSTSANLTG EEPALTPEEV IRQFDGKIDG LVAGSLGAEP KPSTIIDVIS
GKILR
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