| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3697 |
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| Symbol | |
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| ID | 4921621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4401146 |
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| End bp | 4402318 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165319 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001095822 |
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| Protein GI | 127514625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTA TTCCAAGTGA ACGATTAGCA CAGGCAAGAC GCCTACTCTT TGTTTCCCCT
TTGGCGCTGG GCGATTTTCT CTATATCAAG ACCTTTCTGG CCGCCCTCAA ACAGCAGCAT
CCAGCACTCG AGGTGGATAT CTGGCTCGAC GATAACCGCA ACAACCAAGA CAGTTGGCGC
CTCTCTCGCA GCAAGATCAT GCAGCAGTGG ATCGCCGCCG AGCCCGCCTT TAGCCGCAGC
TATGGTTGCA GCGACAGCAA GGCGATGCAA GATAGACAGG TCGAGGCCGC CAAGGCCCTA
GATTACGACC TGGTGATCAC TCACTCAGGC AGCAAGAGCG AGCAGTTTTC GGCGCTGGCC
AGACGCATCA GTCCCAAGGG CTTTATCGTC ACCAGCCTGG CCAAATCCAA ATTTGGTGGC
CTGCTCGACC CCTGGTTTTT CCGCCACAGC GACAAGACCT TTAAGATAGA TGTGGCAGCC
CTCGGCGAGC AGCACCATAT TACCGATCGC TACTATCAGC TGCTGCACAG AGTTGCCGGG
CTGACACTGG ACAAATCGGC CTTCATGCCG TCGCTGACCA TCACGCCAGA GGTTACCGAG
ACGGCAAAGG CCTGGCTAAG CAAGACCTTT CACGGTCAGT CTCAAGGCAG GCTCTATTTT
CTCAACCATC TGTCGACCAA TAAGAAGCGC GACTGGCATC AGTCTCAGCT GTTTGAATTG
ATCGCCCGTC TCACCGAGCA GGCACCAGAC AGTCGCTTCA TCGTCAACAG CACCCCAGAA
AACTTTAGCG CTCTCGAGCA GGCCATCGCC GATGAGCCTA AGCTGGCGAA CAGCCAGGTC
GCAGCCTTTA CCGTGCAAGA CAACTTCTTC GAGCTGCCAG CGATGATCGC CGCCGCCGAT
ATGGTGATCA CGGTCGAAAC TGCCATCATG CACTTCGCCA CCGCCAGTCA GCGCCCGCTT
ATCGCCATGA TGCGGCAGAA GAAGCCCTAC TGGGCGCCGC CTGAAACCAC CAGCTCCAAG
GTGCTATACG CCTCGACGGG CAAGGGCTAT GTCTGCGATA TCGGCGTCGA CGAGGTATTA
GCCACACTTG CCCAGATGTC TGGCCCCCAG ATGCCTAATA CCCAGATATC TGACGACGAG
AAGCCAGCCG CCCATTCACA GTTAAGTTCA TAA
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| Protein sequence | MSLIPSERLA QARRLLFVSP LALGDFLYIK TFLAALKQQH PALEVDIWLD DNRNNQDSWR
LSRSKIMQQW IAAEPAFSRS YGCSDSKAMQ DRQVEAAKAL DYDLVITHSG SKSEQFSALA
RRISPKGFIV TSLAKSKFGG LLDPWFFRHS DKTFKIDVAA LGEQHHITDR YYQLLHRVAG
LTLDKSAFMP SLTITPEVTE TAKAWLSKTF HGQSQGRLYF LNHLSTNKKR DWHQSQLFEL
IARLTEQAPD SRFIVNSTPE NFSALEQAIA DEPKLANSQV AAFTVQDNFF ELPAMIAAAD
MVITVETAIM HFATASQRPL IAMMRQKKPY WAPPETTSSK VLYASTGKGY VCDIGVDEVL
ATLAQMSGPQ MPNTQISDDE KPAAHSQLSS
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