| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3683 |
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| Symbol | |
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| ID | 4921607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4387826 |
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| End bp | 4388638 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640165305 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001095808 |
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| Protein GI | 127514611 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2998] ABC-type tungstate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAGC TAAAATCGAT ACTCAGCCTA GCGATCGTCG CCAGTGCCCT AACATTAACC
TCAGCCCAGG CAGAAGAGAT CATTAAACTG GCCACCACCA CCAGCACAGA AAACTCTGGC
CTACTCAAGC ACCTACTGCC TAAGTTCGAG CAGGAGTCTG GCTACAAGGT TCAGGTTATC
GCCACAGGCA CGGGTAAGGC CCTCAAGCTG GCTCGCCAGG GCGACGTGGA CGTGGTGATG
ACTCACGCCC CAGCTGCCGA AGCCAAATTC GTTAACGAAG GCTACGGCAT ACTGCCACGC
GGCATCATGG AAAACGATTT TGTGATCTTG GGCCCGAAAA ATGACCCAGC TAAGATCCGT
AGCAGTAAGA CAGCCGAAGA GGCCTTTGCT AAAATAGCCG ACTCTGGCGC GGGCTTCGTC
TCTCGCGGTG ACAACTCTGG TACCAACATG AAAGAGTTGA TCATCTGGAA AGGCGCCAAG
GTTGAGCCAA CATTTAACGG CTACCGCGCC GTGGGCCAAG GCATGGGTAA GACACTGCTG
ATGGCCAACG AGCTACAAGC CTACACACTA TCTGACCGCG GCACTTTCGT GGCCTACAAG
GCGAAGCTAG ATCTCGCGGT TGACTATGAT GGCGGTAAGA CACTGGCGAA TCCTTATCAA
ATCATGTTGA TCAACCCTGA GAAATACCCA GATCTTAACC ACAAAGGTGC TAAGGCGCTG
AGTGACTGGC TGATCGGCAA CGAAGCCCAA GGCATGATTA ACAGCTACAC CGTACAGGGT
GAGCAACTAT TTAAGGCAAC ATATAGCGAA TGA
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| Protein sequence | MLKLKSILSL AIVASALTLT SAQAEEIIKL ATTTSTENSG LLKHLLPKFE QESGYKVQVI
ATGTGKALKL ARQGDVDVVM THAPAAEAKF VNEGYGILPR GIMENDFVIL GPKNDPAKIR
SSKTAEEAFA KIADSGAGFV SRGDNSGTNM KELIIWKGAK VEPTFNGYRA VGQGMGKTLL
MANELQAYTL SDRGTFVAYK AKLDLAVDYD GGKTLANPYQ IMLINPEKYP DLNHKGAKAL
SDWLIGNEAQ GMINSYTVQG EQLFKATYSE
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